Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4118132	4118172	41	82 [0]	[0] 45	yrfD	predicted pilus assembly protein

TTTTTTACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGC  >  W3110S.gb/4118173‑4118232 |                                                            ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTTTGGGc  <  1:1140462/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGTGc  <  1:1493221/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:654816/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:29067/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:298743/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:322073/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:328377/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:336232/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:420760/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:47556/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:534607/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:596305/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:624001/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:25231/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:724205/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:734585/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:737129/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:748105/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:774580/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:801660/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:87336/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:905266/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:917602/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:920641/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1400000/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1109708/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1222650/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1223527/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1229329/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1229949/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1264239/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1302164/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1334748/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1382436/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1398336/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:264564/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1439428/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1459266/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1492288/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1597019/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1620491/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1648277/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:181639/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:18770/60‑1 (MQ=255) ttttttACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGc  <  1:1065064/60‑1 (MQ=255) |                                                            TTTTTTACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGC  >  W3110S.gb/4118173‑4118232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑