Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4186499	4186734	236	90 [0]	[0] 42	pioO	part of gsp divergon involved in type II protein secretion

TCAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTCGC  >  W3110S.gb/4186735‑4186795 |                                                             tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:64926/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1064034/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:201299/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:292480/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:342627/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:347559/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:39315/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:47580/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:556064/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:608267/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:647922/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:19971/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:669530/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:706305/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:759925/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:760657/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:804583/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:875927/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:899349/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:911591/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:997107/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1510705/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1068854/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1083062/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1171679/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1177455/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1239777/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1295831/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1345710/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1360469/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1360925/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1380146/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:179496/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1528648/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1546369/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1551695/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1571817/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1615342/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:1639487/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:173841/61‑1 (MQ=255) tcAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:178782/61‑1 (MQ=255) tcAAAAAACAGCAACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTcgc  <  1:512045/61‑1 (MQ=255) |                                                             TCAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTCGC  >  W3110S.gb/4186735‑4186795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑