Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4549879	4549948	70	20 [0]	[0] 50	fimD	outer membrane usher protein, type 1 fimbrial synthesis

CCCCAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTA  >  W3110S.gb/4549949‑4550010 |                                                              ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATTGGCAAGAATTACCGCCAGGGACGTa  <  1:868303/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:73615/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:236152/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:323548/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:335705/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:431917/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:490619/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:499203/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:527276/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:589158/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:623569/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:634930/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:67919/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:7230/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1641462/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:745851/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:75566/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:786949/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:788746/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:827776/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:835041/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:860790/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:891617/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:961888/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:993537/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1352810/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1039715/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1078073/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1083190/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1102005/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1210765/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1216962/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1235657/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1266272/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1313307/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1315198/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1315253/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1333983/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1003138/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1361703/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1388363/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1400355/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1418843/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1497167/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:150609/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1528796/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1579626/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1591068/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1597815/62‑1 (MQ=255) ccccAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTa  <  1:1602979/62‑1 (MQ=255) |                                                              CCCCAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTA  >  W3110S.gb/4549949‑4550010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑