Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	223459	228674	5216	8 [0]	[0] 94	rrsH–rrlH	rrsH,ileV,alaV,rrlH

CTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGC  >  W3110S.gb/228675‑228736 |                                                              cTGTTTTGGCGGATTGAGAGAAGATTTTGAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:131264/1‑62 (MQ=14) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTg                             >  1:1031099/1‑35 (MQ=33) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACa                        >  1:638719/1‑40 (MQ=33) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAg      >  1:1025854/1‑58 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAg   >  1:959350/1‑61 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAg   >  1:262497/1‑61 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAg   >  1:376518/1‑61 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:370553/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:544124/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:54365/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:513450/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:509678/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:506697/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:484292/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:463977/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:422952/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:397577/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:931711/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:574661/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:355479/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:353378/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:351992/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:306137/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:305874/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:301045/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:286748/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:227000/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:259894/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:696427/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:857839/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:854118/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:844584/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:823249/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:789839/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:786836/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:754087/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:735638/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:722363/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:718846/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:887699/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:678344/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:920561/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:652584/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:650695/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:650680/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:929932/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:62181/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:597818/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:589136/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1145757/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:135194/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1336968/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1335675/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:132604/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1320662/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1287905/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1247714/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1247476/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:123658/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1220643/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1149612/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1368395/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:112718/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:111849/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1116553/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1110516/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:10905/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1053377/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1043415/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1034356/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1015747/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1009636/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:157397/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1003156/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:224899/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:222641/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:191495/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:191294/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:188754/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:171219/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1632363/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1600778/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1588537/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:255397/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1525299/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1516453/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:150109/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1479561/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1473884/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1467599/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:143208/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:139998/1‑62 (MQ=31) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1374503/1‑62 (MQ=31) cTGTTTTGGCGGAGTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc  >  1:1469035/1‑62 (MQ=14) |                                                              CTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGC  >  W3110S.gb/228675‑228736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑