Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	665257	665982	726	87 [0]	[0] 75	[rlpA]–[mrdB]	[rlpA],[mrdB]

TGACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAG  >  W3110S.gb/665983‑666044 |                                                              tgACTGAGTGCCGTGCAGCCAGTCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:558592/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATc                          >  1:1547006/1‑38 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAAttt     >  1:1356717/1‑59 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTa   >  1:1101975/1‑61 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:576468/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:589264/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:574314/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:556578/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:538677/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:533989/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:486086/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:473487/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:421260/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:400178/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:383604/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:351401/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:316670/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:315213/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:305915/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:271614/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:779425/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:994975/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:983216/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:90085/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:89530/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:881931/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:876555/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:875195/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:845254/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:784482/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:584203/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:760348/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:75517/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:739725/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:73539/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:685456/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:636293/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:624984/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:18622/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:118999/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:267735/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1296047/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1269590/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1264123/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:126195/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1243920/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1238124/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1229923/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1307130/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1185850/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1164899/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1143630/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1122116/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1117629/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1101825/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1084800/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1038407/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1532680/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:242604/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1022715/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1629239/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1600853/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1582347/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1578989/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1568197/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1561495/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1311319/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1436148/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1421307/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1401972/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1398437/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1397609/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1348350/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAg  >  1:1320459/1‑62 (MQ=255) tgACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATATTAg  >  1:1299875/1‑62 (MQ=255) |                                                              TGACTGAGTGCCGTGCAGCCAGCCTTTGCCGCGTAATCCGCCGGAGCCAATAGCAATTTTAG  >  W3110S.gb/665983‑666044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑