Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	999048	999211	164	19 [0]	[0] 58	ycbR	predicted periplasmic pilin chaperone

GGAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGC  >  W3110S.gb/999212‑999256 |                                             ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:672821/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:328683/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:339753/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:343001/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:343977/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:398564/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:439713/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:497922/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:515458/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:523287/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:559544/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:565933/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:572573/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:581454/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:630490/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:263603/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:677598/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:691913/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:699223/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:740540/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:798824/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:801571/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:819767/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:933461/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:941178/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:956717/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:95928/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:966572/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:967201/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:129397/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1047546/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1077668/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1098207/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1108672/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1112639/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1129867/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1131179/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1131427/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1131975/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1188820/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:120198/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1241939/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1272738/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1279314/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1007495/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:133981/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1388441/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1437622/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1454798/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1458790/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1479435/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1551774/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1596457/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1597746/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1605225/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:1640246/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:181281/45‑1 (MQ=255) ggAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGc  <  1:261527/45‑1 (MQ=255) |                                             GGAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGC  >  W3110S.gb/999212‑999256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑