Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1102873 1103032 160 7 [0] [2] 105 csgD DNA‑binding transcriptional activator in two‑component regulatory system

Only 100 of 105 total aligned reads displayed.

CAAGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACG  >  W3110S.gb/1103032‑1103092
 |                                                           
cAAGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:986036/61‑1 (MQ=255)
cAAGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:693661/61‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:365292/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:546613/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:538345/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:533334/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:525400/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:518419/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:481928/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:476451/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:473315/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:445186/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:423255/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:408560/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:599772/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:34894/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:346438/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:311203/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:307664/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:284849/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:258156/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:244274/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:240236/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:179929/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1637360/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1636104/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:836126/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:987142/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:978802/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:971776/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:955082/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:917851/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:91473/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:913481/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:903109/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:893500/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:852703/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:840058/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:574367/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:822620/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:801367/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:801173/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:794602/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:760322/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:747438/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:700672/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:690500/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:630062/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:625629/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1616293/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1203517/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1350245/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1340458/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1329322/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1307404/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1300645/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1272581/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1261531/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1258718/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1239922/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1224245/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1210362/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1205787/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1363623/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1195592/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1191747/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1178915/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1141922/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1132569/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1127897/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1121897/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1087457/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1079227/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1034757/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1023836/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1518789/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1615580/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1607682/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1607174/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1604642/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1602722/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1598674/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1594566/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1588956/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1580870/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1577079/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1533527/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1526712/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:101729/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1503625/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1495523/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1495065/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1492018/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1474971/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1443879/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:142799/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1420143/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1407945/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1403278/60‑1 (MQ=255)
 aaGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACg  <  1:1382174/60‑1 (MQ=255)
 |                                                           
CAAGCTTTTGCGTAAAGTAGCATTCGCCGCGCAGGACGCCTTGCAACCCATTGACAACACG  >  W3110S.gb/1103032‑1103092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑