Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1221321	1221350	30	88 [0]	[0] 28	ymgF/ycgH	hypothetical protein/ECK1157:JW5901:b1169; hypothetical protein, N‑ter fragment

CACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATATAAATA  >  W3110S.gb/1221351‑1221409 |                                                           cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:314748/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:972250/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:940424/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:844856/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:840794/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:770770/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:750157/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:727413/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:66985/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:636822/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:520488/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:442463/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:397682/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:334926/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1043399/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:260904/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:179968/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:176137/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1599096/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1513994/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1480925/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1275327/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:124654/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1211964/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1190380/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1089026/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:1073109/59‑1 (MQ=255) cACTGAAGACGAAAGCCATGCTGCGAAAGTGGATGACGGTGTAACTGGATATataaata  <  1:241744/59‑1 (MQ=255) |                                                           CACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATATAAATA  >  W3110S.gb/1221351‑1221409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑