Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1291339	1291438	100	56 [5]	[0] 55	rssA	conserved hypothetical protein

TCTGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGT  >  W3110S.gb/1291439‑1291498 |                                                            tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGgcagca                     >  1:550113/1‑41 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCgg   >  1:1015234/1‑59 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:45158/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:975646/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:475027/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:501003/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:529736/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:57890/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:611055/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:647609/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:664192/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:676791/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:696678/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:774434/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:830955/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:835861/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:847180/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:866742/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:874465/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:875375/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:875909/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:880445/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:884938/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:899095/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:923412/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:927020/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:973030/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1011886/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1512646/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1074781/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1088747/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1106849/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1194801/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1196647/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1254909/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1313630/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1321484/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1328818/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1337054/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1374348/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1458008/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1479846/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:426703/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1541754/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1574030/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1607321/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1649010/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:1651477/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:185604/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:260777/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:279546/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:301355/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:318774/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:327541/1‑60 (MQ=255) tctGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGt  >  1:396966/1‑60 (MQ=255) |                                                            TCTGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGT  >  W3110S.gb/1291439‑1291498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑