Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1391470	1392003	534	94 [0]	[0] 48	[ycjG]–[mpaA]	[ycjG],[mpaA]

CGCCGGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAG  >  W3110S.gb/1392004‑1392064 |                                                             cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGGATTGGCCCGTAACCCCAACTGGCAg  <  1:423707/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:721184/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:461772/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:465277/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:48594/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:508498/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:52148/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:588826/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:604831/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:679289/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:687252/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:702510/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:2376/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:751272/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:754062/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:792887/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:807489/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:81925/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:83362/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:855496/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:8562/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:907658/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:912770/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:933053/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1441365/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1069533/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1075713/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1079982/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1085871/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1274/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1277930/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1281622/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:134039/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1344097/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1401936/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1421919/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1042925/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1453758/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1470225/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1471358/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1471822/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1522067/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1539992/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1564439/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1624944/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:163240/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:1646688/61‑1 (MQ=255) cgccgGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAg  <  1:198422/61‑1 (MQ=255) |                                                             CGCCGGAAAGTTTCTGTTTAAATCCACACCATTAGCATTGGCCCGTAACCCCAACTGGCAG  >  W3110S.gb/1392004‑1392064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑