Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1434989	1436768	1780	25 [0]	[0] 39	[pinR]–ynaE	[pinR],ynaE

ATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGG  >  W3110S.gb/1436769‑1436827 |                                                           aTGCCGGAACGCCCAGCATAAGAAATCTGATATaaaaaa                      >  1:1306575/1‑39 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACtg                   >  1:256914/1‑42 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:66107/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1602285/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:315192/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:406581/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:444193/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:45313/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:545583/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:546748/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:557552/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1579307/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:67860/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:720018/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:725034/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:72929/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:764448/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:786488/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:793847/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:85541/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1452361/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1134623/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1140555/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1211183/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:121278/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1218177/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1228426/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1335324/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1383716/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1412243/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1601307/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1454718/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1488385/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1507427/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:15197/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:152550/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1551509/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1573154/1‑59 (MQ=255) aTGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACgg  >  1:1046475/1‑59 (MQ=255) |                                                           ATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGG  >  W3110S.gb/1436769‑1436827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑