Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1563946	1564106	161	13 [0]	[1] 70	ddpA	D‑Ala‑D‑Ala transporter subunit

GCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGA  >  W3110S.gb/1564102‑1564161      |                                                       ctatatCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:829145/58‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTTCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1433829/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:472123/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:594764/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:576484/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:57104/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:554363/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:550111/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:548940/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:493419/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:485732/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:619646/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:46706/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:421821/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:397134/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:374086/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:366632/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:366406/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:358993/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:795818/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:985201/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:982904/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:937590/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:935136/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:928856/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:8750/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:863185/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:820277/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:320851/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:781597/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:761524/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:688289/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:688015/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:674802/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:641742/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:631635/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1262979/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1002044/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1400911/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1342427/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1328498/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1312660/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1278184/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1276861/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1265328/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1410865/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1233459/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1203058/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1202862/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:116159/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1088814/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1086572/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1059006/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1587042/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:292885/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:287062/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:231075/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:225327/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:224785/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:217971/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:185081/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1619883/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1419088/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1570957/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1569649/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:153789/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1519765/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1484678/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1470161/55‑1 (MQ=255)      tCTTTTGGTACGGCGGCGTGAGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa  <  1:1293540/55‑1 (MQ=255)      |                                                       GCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGA  >  W3110S.gb/1564102‑1564161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑