Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1860512	1861298	787	31 [0]	[0] 40	[ydjJ]–[ydjK]	[ydjJ],[ydjK]

ATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGC  >  W3110S.gb/1861299‑1861358 |                                                            aTACCTTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1450102/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGTATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1336159/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:66327/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1001284/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:220157/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:288989/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:295685/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:303978/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:544140/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:544339/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1472306/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:674106/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:680104/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:759926/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:80385/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:83468/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:868396/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:879807/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:931443/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:936642/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1227482/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1010371/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1030799/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:108782/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1132705/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1136416/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1195202/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1205258/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:12203/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:143049/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:125311/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1276859/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1285130/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1316347/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1326821/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:1351178/1‑60 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcg   >  1:824890/1‑59 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcg   >  1:318771/1‑59 (MQ=255) aTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcg   >  1:1396156/1‑59 (MQ=255) aTACCGTCCGCGCGATTACAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAgcgc  >  1:64232/1‑60 (MQ=255) |                                                            ATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGC  >  W3110S.gb/1861299‑1861358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑