Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1976632	1977118	487	14 [0]	[0] 48	[cheA]–[motB]	[cheA],[motB]

GGCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAC  >  W3110S.gb/1977119‑1977180 |                                                              ggCTCATTCTGGCTTTCGGCGTTTTCATGCGAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:356207/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:536254/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1008618/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:29286/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:395702/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:407890/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:441270/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:467900/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:492708/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:527826/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:530244/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:531421/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:285340/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:546555/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:568790/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:609997/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:685924/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:789683/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:831534/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:831678/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:858106/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:88052/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:889616/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:901868/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1521964/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1085370/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1086323/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1100312/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1207506/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1238517/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1326106/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:146081/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1505791/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:246396/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1522474/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1531539/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1536212/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1565853/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1592943/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:168615/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:203033/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:208657/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:231759/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGATCAGTAc  <  1:115862/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCGTGTTTGTTCAGTAc  <  1:165649/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGTTTTCATGCAAAACGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1186820/62‑1 (MQ=255) ggCTCATTCTGGCTTTCGGCGCTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:468582/62‑1 (MQ=255) ggCTCATTCTGGCTGTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAc  <  1:1479613/62‑1 (MQ=255) |                                                              GGCTCATTCTGGCTTTCGGCGTTTTCATGCAAAATGGCCTGTTCGGCTTGTTTGTTCAGTAC  >  W3110S.gb/1977119‑1977180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑