Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2015813	2015882	70	6 [0]	[0] 25	fliF	flagellar basal‑body MS‑ring and collar protein

TGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAT  >  W3110S.gb/2015883‑2015944 |                                                              tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:964076/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:773993/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:629880/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:353075/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:356418/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCa   >  1:383895/1‑61 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:358160/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:969245/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:92957/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:915135/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:844735/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:69867/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:418908/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:407187/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:397676/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1176793/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:248246/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:161043/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:158567/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1568218/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1356436/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1232433/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1200849/1‑62 (MQ=255) tGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCAATGTGCa   >  1:1593748/1‑61 (MQ=255) tGACGGTAAATCTGTCACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAt  >  1:1429127/1‑62 (MQ=255) |                                                              TGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCAT  >  W3110S.gb/2015883‑2015944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑