Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2204161	2204429	269	113 [0]	[0] 62	yehI	conserved hypothetical protein

CCGCCCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATAA  >  W3110S.gb/2204430‑2204490 |                                                             ccgccCTTTTGCTCTAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:546788/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCTATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1052456/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:307554/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:453142/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:443640/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:430498/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:384109/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:377536/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:373119/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:313469/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:488321/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:287879/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:28368/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:258573/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:246254/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:245766/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:220351/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:457320/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:206440/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:512879/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:531523/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:58215/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:615419/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:625386/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:630555/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:638418/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:665213/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:702748/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:727190/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:847466/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:957421/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:986693/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1335580/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1039681/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1041619/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1065574/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1079413/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1080408/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1083924/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1103001/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1109272/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1119162/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:113263/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1183013/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1208789/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1293079/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1311459/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1024293/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1338040/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:136055/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1360820/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1361821/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1416899/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1443701/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1526732/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:155264/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1553720/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:15684/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:16344/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:1640053/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:193887/61‑1 (MQ=255) ccgccCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATaa  <  1:202726/61‑1 (MQ=255) |                                                             CCGCCCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATAA  >  W3110S.gb/2204430‑2204490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑