Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2645356	2645567	212	41 [0]	[0] 41	pbpC	fused transglycosylase and transpeptidase

AATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCG  >  W3110S.gb/2645568‑2645629 |                                                              aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCACCCTGCATAGTGAGCg  >  1:431579/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCAt          >  1:295261/1‑54 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGc   >  1:1187308/1‑61 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGc   >  1:85322/1‑61 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGc   >  1:1252485/1‑61 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGc   >  1:148080/1‑61 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:801145/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:304394/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:330370/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:332279/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:414707/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:42974/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:588896/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:7141/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:780221/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:790124/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:266346/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:823558/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:830427/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:834444/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:843527/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:866073/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:921134/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1528047/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1102245/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1165069/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1232761/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1278302/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1366681/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1394427/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1479555/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1488899/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:275573/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1537612/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1590400/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1597227/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1602484/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1622338/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1643051/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:244892/1‑62 (MQ=255) aaTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCg  >  1:1092270/1‑62 (MQ=255) |                                                              AATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGACGAGCAACCTGCATAGTGAGCG  >  W3110S.gb/2645568‑2645629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑