Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2675784	2675947	164	30 [0]	[0] 56	yphE	fused predicted sugar transporter subunits and ATP‑binding components of ABC superfamily

ACGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCCGCG  >  W3110S.gb/2675948‑2676009 |                                                              aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGtat               >  1:1446941/1‑49 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGta                >  1:1388059/1‑48 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAAt        >  1:1473480/1‑56 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1642744/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1612810/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1648762/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:236398/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:281076/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:299583/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:334463/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:336765/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:34116/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:412341/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:421756/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:52065/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:52750/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:532184/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:560145/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:567997/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:593622/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:619479/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:756126/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:773941/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:834818/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:848836/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:8762/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:909331/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:940689/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:983808/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:989888/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1358378/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1078689/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1096968/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1112164/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1133988/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1163575/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1194148/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1223475/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1263451/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1265416/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1272142/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1293356/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1350396/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1624365/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1386280/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1481292/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:149308/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1509342/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1516480/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1532967/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:153362/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1550226/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1602089/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1611025/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1612697/1‑62 (MQ=255) aCGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCcgcg  >  1:1037211/1‑62 (MQ=255) |                                                              ACGCCCAACCAGGGAATGATCCCCGCTTCTTTGCGGTTTTCTGGCGTATAGCCAATGCCGCG  >  W3110S.gb/2675948‑2676009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑