Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2866739	2866976	238	299 [0]	[0] 59	nlpD	predicted outer membrane lipoprotein

GGTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACG  >  W3110S.gb/2866977‑2867038 |                                                              ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAATAGTGTGTCGCCTTTTTTCACg  <  1:1645329/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:639070/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:335540/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:384565/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:388672/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:419666/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:469027/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:47341/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:523295/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:530912/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:535668/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:57693/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:586907/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:59618/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:6004/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:23006/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:649119/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:711505/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:732845/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:733976/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:740508/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:744244/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:75118/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:762903/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:844613/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:860172/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:86185/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:925367/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:92656/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:964724/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1390634/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1098361/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1110299/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1148092/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1162030/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1171868/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1195125/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1223668/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1256900/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:128146/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:130676/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1322545/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1368785/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1373668/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1387720/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:238423/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1403243/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1429670/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1451925/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1475156/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1493494/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1542692/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1562467/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1578528/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1590701/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:1599703/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:194069/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:224823/62‑1 (MQ=255) ggTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACg  <  1:108931/62‑1 (MQ=255) |                                                              GGTCACGGAAATCGTTGCCAGTAATCCAGGCGATATAGAAAAGTGTGTCGCCTTTTTTCACG  >  W3110S.gb/2866977‑2867038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑