Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3038617	3038667	51	47 [0]	[0] 58	fldB	flavodoxin 2

TCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTCGAC  >  W3110S.gb/3038668‑3038729 |                                                              tCCCGACCTGTGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:960985/1‑62 (MQ=255) tCCCGACCTGTGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1460375/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGAc                             >  1:1165257/1‑35 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACt                            >  1:1524000/1‑36 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGa                        >  1:46697/1‑40 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:98733/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1628853/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:172936/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:225342/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:259964/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:309768/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:31073/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:333959/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:340050/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:361464/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:425335/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:964740/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:963396/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:599426/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:667764/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:686852/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:70591/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:762306/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:82262/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:860606/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:864522/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:897469/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:936239/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:94312/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1341608/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1040937/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:109959/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1111835/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1118635/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1130871/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1151728/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:119811/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1219568/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1235331/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1272727/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1289597/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:133268/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:163852/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1354177/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1365206/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:138450/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:141186/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1428795/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1457284/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1520216/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1536785/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1538077/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:1548462/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgaa  >  1:237260/1‑61 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTCGGATCAGCTcgac  >  1:1052518/1‑62 (MQ=255) tCCCGACCTGGGATTTTGGTGAAATCCACGAAGACTGGGAAGCCGTCTGGGAta          >  1:543715/1‑53 (MQ=255) tCCCGACATGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTcgac  >  1:480728/1‑62 (MQ=255) tCCAGACCTGCGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCt                >  1:1649566/1‑48 (MQ=39) |                                                              TCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTCGAC  >  W3110S.gb/3038668‑3038729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑