Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3112596	3113073	478	33 [0]	[0] 37	[pppA]	[pppA]

TCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGG  >  W3110S.gb/3113074‑3113134 |                                                             tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCGCGATAAGCAGGCGCATCgg  >  1:1303516/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:218371/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:192291/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:276341/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:387975/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:428494/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:442589/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:483595/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:511849/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:600576/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:612997/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:723655/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:788336/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:801275/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:81259/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:877033/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:926567/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:992881/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1345603/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1054234/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1056201/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1071232/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1080591/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1252521/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1288108/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1298319/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1299276/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1044137/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1355045/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1408733/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1585269/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1587869/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:1591709/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:189068/1‑61 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCg   >  1:43932/1‑60 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCg   >  1:1637881/1‑60 (MQ=255) tCTGCCAGCGCAAATAATCGCGGCTTTCCACGTCTGTAGGCCCGATAAGCAGGCGCATCgg  >  1:668521/1‑61 (MQ=255) |                                                             TCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGG  >  W3110S.gb/3113074‑3113134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑