Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3214170	3214324	155	42 [0]	[0] 43	[ileX]	[ileX]

CACCAGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAC  >  W3110S.gb/3214325‑3214386 |                                                              caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:574917/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:301974/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:351622/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:355429/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:390691/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:412535/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:414589/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:458394/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:496340/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:568612/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:573896/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:268647/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:645724/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:692380/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:721282/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:753972/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:765084/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:813498/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:815622/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:905696/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:909528/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:928149/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1351988/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:109521/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1113203/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1115433/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1164161/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1236607/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1267531/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1269879/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1315072/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1326564/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1346320/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1034031/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1434381/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1473120/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:1589402/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:160266/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:175692/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:198276/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:249702/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:25464/62‑1 (MQ=255) caccaGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAc  <  1:261246/62‑1 (MQ=255) |                                                              CACCAGATATAGCAAAGGCTGACGAGAAATCGTCAGCCTTTTTCTTTTTATATATCAGTTAC  >  W3110S.gb/3214325‑3214386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑