| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 168,321 | T→C | L280L (TTG→CTG) | fhuA → | ferrichrome outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 168,321 | 0 | T | C | 99.1% | 325.6 / ‑5.2 | 113 | L280L (TTG→CTG) | fhuA | ferrichrome outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (0/112); minor base A (0/1); total (0/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGG > W3110S.gb/168297‑168358 | ccGGTAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:783740/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:344734/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:537929/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:534446/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:530719/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:525452/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:489385/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:483712/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:468781/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:423932/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:53832/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:302244/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:295836/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:280485/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:259848/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:189104/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:17491/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:174631/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1641259/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:16265/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:810872/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:975758/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:954234/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:947923/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:946903/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:932258/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:891211/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:866383/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:836579/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1053216/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:790918/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:754662/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:749836/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:663190/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:585454/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:584499/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:556938/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:539553/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1218712/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1468543/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1468145/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1452468/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:137180/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1327625/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1320468/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1306885/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1253113/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1241769/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1618203/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1201665/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1190649/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:118648/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1158371/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1132268/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1130055/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1100465/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1092705/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1016001/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1479986/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1560827/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:161983/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1590165/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1553755/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1578017/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1577419/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:150169/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1491460/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCAGCCAAACgg < 1:183462/62‑1 (MQ=255)ccGGAAACTGGTTATTACGGCTGGATGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:146886/62‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:179780/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1297254/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:751787/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:759341/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1084468/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:829862/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:850370/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:616547/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:615814/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:597232/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1480948/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:345264/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:579608/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:351318/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:541705/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:968220/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:36697/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1392606/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:141298/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:377422/61‑1 (MQ=255) cGGAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:482142/61‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:984332/60‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:722114/60‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:608434/60‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1330738/60‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1413943/60‑1 (MQ=255) ggAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:452954/60‑1 (MQ=255) gAAACTGGTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:1534933/59‑1 (MQ=38) ctggTTATTACGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:199310/53‑1 (MQ=38) ttaCGGCTGGCTGCCGAAAGAGGGGACCGTTGAGCCGCTGCCAAACgg < 1:736078/48‑1 (MQ=38) taCGGCTGGCTGCCGAAAGAGGTGACCGTTGAGCCGCTGCCAAACgg < 1:710347/47‑1 (MQ=37) | CCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGG > W3110S.gb/168297‑168358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |