| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 225408 = | NA (NA) | 5 (0.170) | 3/90 | NT | NA | noncoding (28/77 nt) | ileV | tRNA‑Ile |
| ? | W3110S.gb | 225425 = | NA (NA) | noncoding (45/77 nt) | ileV | tRNA‑Ile | |||||
CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/225482‑225408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > W3110S.gb/225425‑225494 CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGG > 1:496247/1‑71 TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG > 1:3118201/1‑71 TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGT > 1:1075882/1‑70 TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG < 1:2234789/69‑1 TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:1734518/1‑68 TTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:3019708/1‑63 CGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG < 1:2184075/60‑1 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:2986391/1‑53 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:1831436/1‑53 TTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:2924848/1‑48 AGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:376898/1‑37 GTGGACTTGAACCACCGACCTCACCCTTATCAGGGt > 1:1170240/1‑35 GTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:2996183/1‑35 CACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAA < 1:200119/51‑1 CACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGG > 1:1681133/1‑43 CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAA > 1:1556053/1‑69 CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAA > 1:1512903/1‑69 CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTC > 1:778579/1‑38 GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTG < 1:1124890/57‑1 GGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCA > 1:1364538/1‑45 GGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATT > 1:593268/1‑41 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTAC < 1:600683/71‑1 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAA < 1:1401532/51‑1 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAA < 1:206408/38‑1 GTGAGGCCGGTGGTGCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTT < 1:2942793/63‑1 TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACA > 1:2223804/1‑71 TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACA > 1:2149722/1‑71 GAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > 1:979695/1‑71 GAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAA > 1:231418/1‑65 CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/225482‑225408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > W3110S.gb/225425‑225494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |