New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb 225408 =NA (NA)5 (0.170) 3/90 NT NA noncoding (28/77 nt) ileV tRNA‑Ile
?W3110S.gb 225425 = NA (NA)noncoding (45/77 nt) ileV tRNA‑Ile

CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/225482‑225408
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT  >  W3110S.gb/225425‑225494
                                                                                                                                                 
CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGG                                                                            >  1:496247/1‑71
    TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG                                                                        >  1:3118201/1‑71
    TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGT                                                                         >  1:1075882/1‑70
    TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG                                                                          <  1:2234789/69‑1
    TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG                                                                           >  1:1734518/1‑68
          TTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG                                                                          >  1:3019708/1‑63
               CGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG                                                                        <  1:2184075/60‑1
                   CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG                                                                           >  1:2986391/1‑53
                   CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG                                                                           >  1:1831436/1‑53
                        TTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG                                                                           >  1:2924848/1‑48
                                    AGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG                                                                          >  1:376898/1‑37
                                     GTGGACTTGAACCACCGACCTCACCCTTATCAGGGt                                                                          >  1:1170240/1‑35
                                     GTGGACTTGAACCACCGACCTCACCCTTATCAGGG                                                                           >  1:2996183/1‑35
                                                          CACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAA                                      <  1:200119/51‑1
                                                          CACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGG                                              >  1:1681133/1‑43
                                                            CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAA                  >  1:1556053/1‑69
                                                            CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAA                  >  1:1512903/1‑69
                                                            CCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTC                                                 >  1:778579/1‑38
                                                                      GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTG                    <  1:1124890/57‑1
                                                                       GGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCA                               >  1:1364538/1‑45
                                                                       GGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATT                                   >  1:593268/1‑41
                                                                        GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTAC    <  1:600683/71‑1
                                                                        GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAA                        <  1:1401532/51‑1
                                                                        GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAA                                     <  1:206408/38‑1
                                                                        GTGAGGCCGGTGGTGCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTT            <  1:2942793/63‑1
                                                                         TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACA   >  1:2223804/1‑71
                                                                         TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACA   >  1:2149722/1‑71
                                                                          GAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT  >  1:979695/1‑71
                                                                          GAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAA        >  1:231418/1‑65
                                                                                                                                                 
CCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/225482‑225408
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT  >  W3110S.gb/225425‑225494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.