| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 273327 = | NA (NA) | 5 (0.160) | 4/92 | NT | NA | coding (1015/1017 nt) | insH | IS5 transposase and trans‑activator |
| ? | W3110S.gb | 273345 = | NA (NA) | coding (997/1017 nt) | insH | IS5 transposase and trans‑activator | |||||
CTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/273399‑273327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTT > W3110S.gb/273345‑273414 CTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA < 1:2074091/71‑1CTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2021341/1‑71CTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA < 1:824484/71‑1 GGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCAC > 1:162781/1‑70 GCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT > 1:1068296/1‑70 GCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT < 1:1619116/70‑1 GCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCAC < 1:1264225/69‑1 ATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT < 1:2755473/67‑1 TTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA < 1:2769476/62‑1 TATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:460883/1‑61 TATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:3037581/1‑61 CGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:1059994/1‑55 CGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2708273/1‑55 GCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA < 1:2965829/54‑1 GCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:3127276/1‑54 GCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2515306/1‑54 TGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT > 1:11302/1‑54 CCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2325517/1‑45 CCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTC < 1:1078576/44‑1 CTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCAC < 1:1857046/45‑1 CTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2753934/1‑44 CGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:507917/1‑38 GGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2064688/1‑37 GGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT < 1:2531679/38‑1 GCGGACCAAATGATACGTCAGTGGGAGAGATCTCA > 1:2208659/1‑35 GTCAGTGGGAGAGATCTCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATC > 1:3097001/1‑71 GTCAGTGGGAGAGATCTCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATC > 1:3128097/1‑71 TCAGTGGGAGAGATCTCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACA < 1:2923502/68‑1 TGGGAGAGATCTCACTAACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAG > 1:729968/1‑71 GGAGAGATCTCACTGACGTATCATTTGGTCCGCCCGA < 1:2245144/37‑1 CACTGAGGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCG < 1:1710393/69‑1 CACTGACGTATCATTTGGTCCGCCCGTAACTGGTTGGCCAGCGTGAATAACATCGCCAGTTGG < 1:867385/63‑1 CACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTA < 1:1515702/66‑1 CACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGT < 1:1191869/64‑1 CACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATA < 1:3137998/49‑1 CACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAAT < 1:2634131/48‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGATTAACATCGCCAGTTGGTTATCGTTT < 1:2692701/71‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTT < 1:1296357/71‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTT < 1:2691018/71‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTT < 1:1651379/71‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGT < 1:2985119/63‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCG < 1:687878/54‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCG < 1:2883590/54‑1 ACTGACGTATCATTTGGTCCGCCCGAAACAGGTTG < 1:199745/35‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGTCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:884255/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:1739062/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:2419914/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT > 1:1651930/1‑71 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:448673/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:1857079/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:186152/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT > 1:1336232/1‑71 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTT < 1:2688912/70‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTT > 1:3042495/1‑70 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTT‑TCGTTTTT < 1:1961178/71‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCA < 1:388435/56‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAAC < 1:2271001/49‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAA < 1:1849371/48‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAA < 1:2411972/48‑1 CTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG < 1:923185/43‑1 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTT > 1:1072704/1‑71 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT < 1:2715369/70‑1 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT > 1:1061023/1‑70 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGT < 1:1823171/67‑1 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTAT > 1:2784743/1‑64 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATC < 1:65575/51‑1 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAAT > 1:1418065/1‑45 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGA > 1:2510535/1‑43 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG < 1:2271986/42‑1 TGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGT < 1:1554557/41‑1 CTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/273399‑273327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTT > W3110S.gb/273345‑273414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |