| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 20030 | NA (NA) | 3 (0.100) | 3/90 | NT | NA | coding (285/504 nt) | insB | IS1 transposase InsAB' |
| ? | W3110S.gb | = 20039 | NA (NA) | coding (276/504 nt) | insB | IS1 transposase InsAB' | |||||
GCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/19957‑20030‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCA < W3110S.gb/20039‑19971 GCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT > 1:2225003/1‑70GCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT > 1:211443/1‑70GCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT > 1:2061430/1‑70 CTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCA < 1:949748/71‑1 TTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > 1:435925/1‑71 TTGCTGATTACGTCCAGCTATCCCATCAGGCGGGAATCATACAGCGGCCAGCCATCCGTCAACCATATCAC > 1:1584970/1‑71 TGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > 1:2623533/1‑70 TGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > 1:792941/1‑70 TGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCA < 1:2034138/69‑1 GCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC < 1:203669/70‑1 GCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC < 1:1460409/69‑1 GCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC < 1:649204/69‑1 GCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC < 1:685979/69‑1 GCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGAGGCCAGCCATCCGTCATCCATATCAC < 1:1334570/69‑1 ACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC > 1:2109658/1‑63 ACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > 1:485542/1‑62 AGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCCTTTGACGTGGTGA < 1:2661637/71‑1 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC > 1:897039/1‑55 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCA > 1:3055040/1‑53 TTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT > 1:2678112/1‑50 TTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATACATAT > 1:2078166/1‑50 TTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT < 1:883338/49‑1 CTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC < 1:1637241/49‑1 CTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC < 1:1249412/48‑1 GGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATAT < 1:804413/40‑1 GGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC < 1:2761888/40‑1 GGATTCATACAGCGGCCAGCCATCCGTCATCCATATCA < 1:2921683/38‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCCTTTGACGTGGTGATAT > 1:658599/1‑48 GCGGCCAGCCATCCGTCATCCATATCACCCTTTGACGTGG < 1:2299816/40‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCT < 1:1866209/71‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCT > 1:2696435/1‑71 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCT > 1:2364642/1‑71 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGC < 1:2255762/70‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAG < 1:102544/69‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAG < 1:2895729/69‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGA < 1:2707286/61‑1 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTG > 1:1113802/1‑60 TCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCT < 1:495534/59‑1 CACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG > 1:2042664/1‑71 CACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGC < 1:1845867/69‑1 CACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCC > 1:2048274/1‑57 CACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAAT > 1:75851/1‑51 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG > 1:1369885/1‑70 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG < 1:2215670/70‑1 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG < 1:1688671/70‑1 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG > 1:1939316/1‑70 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTG > 1:691497/1‑70 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAA < 1:1429891/65‑1 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAA < 1:618495/65‑1 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAA > 1:2262157/1‑60 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTA > 1:1902653/1‑45 ACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTG < 1:1963706/43‑1 CCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCA > 1:237026/1‑71 CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAAT > 1:1177483/1‑48 CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAA < 1:1293116/47‑1 CCTTTGACGTGGTGATATGGATGACGGATGGCTGGC < 1:621832/36‑1 GCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/19957‑20030‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCA < W3110S.gb/20039‑19971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |