| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 37 (1.110) | 31/100 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
Only 100 of 113 total aligned reads displayed.
CATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAT > W3110S.gb/576843‑576980 | tcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaAc > 1:560899‑M2/69‑70 (MQ=255)catcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCAc < 1:1419194/70‑1 (MQ=255)catcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACt > 1:1673572/1‑71 (MQ=255) gtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACt < 1:2124788‑M2/3‑1 (MQ=255) atTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgat > 1:2440756‑M2/1‑67 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:1451049‑M2/63‑70 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCa < 1:1042224‑M2/9‑1 (MQ=255) aCGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCa > 1:333475/1‑62 (MQ=255) aCGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatct < 1:154204‑M2/70‑7 (MQ=255) gaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAg < 1:964386‑M2/11‑1 (MQ=255) gaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAg < 1:1491079‑M2/11‑1 (MQ=255) aaaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacc > 1:1660728‑M2/1‑61 (MQ=255) aaaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacc > 1:1477560‑M2/1‑61 (MQ=255) aaaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacc > 1:3020387‑M2/1‑61 (MQ=255) caatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTgg > 1:2778739‑M2/58‑71 (MQ=255) caatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTg > 1:2112830‑M2/58‑70 (MQ=255) aaaGCCGTTGCTGGTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTCTTAATCACTtga < 1:746982‑M2/63‑4 (MQ=255) atttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGt < 1:3148801‑M2/15‑1 (MQ=255) tttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACt < 1:390486‑M2/3‑1 (MQ=255) tttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTaa > 1:2596764‑M2/55‑71 (MQ=255) ttgaaaacaagaacctcgcttaggcctgtgtccatattacttgggtaggatcaACTGGCCCAAGTGGTAAc > 1:3019554‑M2/54‑71 (MQ=255) tgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaAc > 1:162952‑M2/53‑54 (MQ=255) cGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaa < 1:373804‑M2/71‑17 (MQ=255) gTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaat > 1:2799391‑M2/1‑54 (MQ=255) ttGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaata > 1:2413328‑M2/1‑53 (MQ=255) gctgctgctATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCAc > 1:2606205/1‑50 (MQ=255) aacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATgg > 1:2106525‑M2/49‑71 (MQ=255) acaagaacctcgcttaggcctgtgtccatattacgtgtgtaggatcaAc < 1:558661‑M2/2‑1 (MQ=255) acaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc < 1:1716290‑M2/8‑1 (MQ=255) caagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTa > 1:1934150‑M2/47‑62 (MQ=255) caagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc < 1:8265‑M2/25‑1 (MQ=255) aagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCt < 1:1069857‑M2/26‑1 (MQ=255) ctgctATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCTCTtgatcttacccagcaatagtgga > 1:135946‑M2/1‑47 (MQ=255) ctgctATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggac > 1:80205‑M2/1‑47 (MQ=255) aacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGa < 1:2977119‑M2/29‑1 (MQ=255) ctcgcttaggcctgtgtccatattacgtgggtagtatcaACTGGCCCAAGTGGTAACGATGGTCTgg < 1:1753821‑M2/28‑1 (MQ=255) ctcgcttaggcctgtgtccatattacgtgggtaggatcaAc < 1:1355744‑M2/2‑1 (MQ=255) ctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCa < 1:2356600‑M2/9‑1 (MQ=255) aTTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCAc > 1:2895207/1‑41 (MQ=255) ttGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgc > 1:1550053‑M2/1‑41 (MQ=255) ttGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatctt > 1:1186320‑M2/1‑41 (MQ=255) tcgcttaggcctgtgtccatattacgtgggtaggatcaa > 1:1248475‑M2/39‑39 (MQ=255) ggtggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggc > 1:1502705‑M2/1‑39 (MQ=255) ggtggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtgg < 1:1572341‑M2/61‑23 (MQ=255) gtggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggcta > 1:1439414‑M2/1‑38 (MQ=255) gtggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggct > 1:839815‑M2/1‑38 (MQ=255) ggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagt < 1:2022687‑M2/56‑21 (MQ=255) ggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaata > 1:858816‑M2/1‑36 (MQ=255) aggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:110385‑M2/33‑62 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaa > 1:344341‑M2/1‑33 (MQ=255) gcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa > 1:2588458‑M2/31‑71 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgag < 1:2550123‑M2/70‑40 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgag < 1:191968‑M2/70‑40 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaag < 1:2809190‑M2/66‑36 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtgga < 1:2014773‑M2/54‑24 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtgga < 1:1041790‑M2/54‑24 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatag < 1:871900‑M2/50‑20 (MQ=255) aGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaat < 1:564557‑M2/48‑18 (MQ=255) gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:2990478‑M2/1‑30 (MQ=255) gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:2559472‑M2/1‑30 (MQ=255) cAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtg < 1:264515‑M2/50‑22 (MQ=255) tgtccatattacgtgggtaggatcaACTGGCCCAAg > 1:1657664‑M2/26‑36 (MQ=255) tgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcatac > 1:2636466‑M2/26‑71 (MQ=255) aaTTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaa > 1:630370‑M2/1‑28 (MQ=255) aaTTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgc > 1:1471868‑M2/1‑28 (MQ=255) ttGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtg < 1:2013351‑M2/47‑22 (MQ=255) ttGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagt > 1:1019183‑M2/1‑26 (MQ=255) tccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcatacc < 1:1565869‑M2/47‑1 (MQ=255) tGCTACAGCATCAGTGTTAATCACTtgatcttacccagcaatagt > 1:1015517‑M2/1‑25 (MQ=255) catattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcataccata > 1:2738852‑M2/22‑71 (MQ=255) atattacgtgggtaggatcaACTGGCCAAAGTGGTAACg > 1:2350082‑M2/21‑39 (MQ=255) tattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcata < 1:2269106‑M2/45‑1 (MQ=255) ataGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaag < 1:17863‑M2/56‑36 (MQ=255) ttacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:1785794‑M2/18‑47 (MQ=255) taGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag > 1:592170‑M2/1‑20 (MQ=255) taGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgc < 1:222083‑M2/48‑29 (MQ=255) acgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:7656‑M2/16‑45 (MQ=255) acgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACa > 1:1474292‑M2/16‑67 (MQ=255) acgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAg < 1:1572435‑M2/55‑1 (MQ=255) cATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag > 1:2377738‑M2/1‑17 (MQ=255) cATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag > 1:2778126‑M2/1‑17 (MQ=255) cATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagt < 1:41193‑M2/68‑52 (MQ=255) aTCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:883761‑M2/1‑16 (MQ=255) gtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgt < 1:1266755‑M2/62‑1 (MQ=255) tgtTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:199565‑M2/1‑11 (MQ=255) taggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACaa < 1:1273890‑M2/53‑1 (MQ=255) aggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACaaa < 1:2008608‑M2/54‑1 (MQ=255) ttAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtca > 1:3160009‑M2/1‑9 (MQ=255) ggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgttg < 1:1101148‑M2/64‑1 (MQ=255) aaTCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:1305821‑M2/1‑7 (MQ=255) tcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa > 1:1881616‑M2/4‑44 (MQ=255) tcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgt < 1:295346‑M2/62‑1 (MQ=255) tcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgt < 1:130705‑M2/62‑1 (MQ=255) aTCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac > 1:1081752‑M2/1‑6 (MQ=255) aTCACTtgatcttacccagcaatagtggacacgcggctaagtg > 1:635592‑M2/1‑6 (MQ=255) aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAt < 1:2622998‑M2/70‑1 (MQ=255) aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAt > 1:1046001‑M2/2‑71 (MQ=255) aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAt > 1:3123238‑M2/2‑71 (MQ=255) aCTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca < 1:1011063‑M2/52‑50 (MQ=255) aCTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTa > 1:3003956/1‑69 (MQ=255) | CATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAT > W3110S.gb/576843‑576980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |