| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 226403 | NA (NA) | 3 (0.060) | 3/90 | NT | NA | noncoding (645/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | W3110S.gb | = 226408 | NA (NA) | noncoding (650/2904 nt) | rrlH | 23S ribosomal RNA | |||||
TATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/226329‑226403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttaacGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCTG < W3110S.gb/226408‑226339 TATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTC < 1:4174953/70‑1 ATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCT > 1:2731903/1‑70 ATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTC < 1:761904/69‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACTGAATAGGGGAGCCGAAGGGAAACCGAGTCTT > 1:2217945/1‑70 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA < 1:1195870/71‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA < 1:2172954/71‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1927778/70‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT > 1:2915584/1‑70 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:976314/70‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT > 1:4377431/1‑70 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:2590512/70‑1 TAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:523301/70‑1 AATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA > 1:3066576/1‑71 AATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA > 1:3198441/1‑71 AATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA > 1:2604731/1‑71 ATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC < 1:3325758/71‑1 ATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC < 1:2233364/71‑1 ATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA < 1:634847/70‑1 ATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA < 1:1106646/70‑1 ATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTC > 1:3827622/1‑66 TGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTC > 1:1900364/1‑65 CAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA > 1:4726270/1‑63 GCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:4708459/60‑1 CGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT > 1:38840/1‑59 GACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA < 1:556067/59‑1 CTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:3688795/56‑1 TTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC > 1:1676179/1‑58 TATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGTAGGGAAACCGAGTCTTAACaga > 1:2755300/1‑57 ATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAACGCCCAGTTAAGACT < 1:761809/70‑1 TTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:2064928/50‑1 TTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:2136932/50‑1 TTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:4951785/50‑1 TTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1508282/50‑1 TCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAA > 1:2381480/1‑51 AGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC > 1:1796542/1‑47 AAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1037042/41‑1 AGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAACGCCCA > 1:2818045/1‑48 AGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC > 1:1835052/1‑43 AGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC > 1:4422302/1‑43 AGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:4833945/40‑1 GGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC > 1:3341342/1‑42 GGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA < 1:4831119/40‑1 GGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1310090/39‑1 GGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:4624298/39‑1 GTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTA < 1:601042/39‑1 GTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:4652174/38‑1 GTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1890998/38‑1 TAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:3892354/36‑1 TAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTT < 1:1437189/36‑1 ACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAACGCCCAGTTAAGACTCG < 1:2243604/53‑1 GAGCCGAAGGGAAACCGAGTCTTAACGCCCAGTTA < 1:308629/35‑1 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT > 1:2584529/1‑71 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT > 1:450145/1‑71 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT < 1:876594/71‑1 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT < 1:571377/71‑1 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT < 1:4242062/71‑1 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGT > 1:2062691/1‑71 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAG > 1:328072/1‑70 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAG > 1:334162/1‑70 CTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAAT > 1:4555223/1‑65 TTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTC > 1:4681940/1‑71 TTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAAT < 1:2526226/64‑1 TTAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACC < 1:2702451/52‑1 TAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG > 1:4355218/1‑71 TAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG > 1:4817146/1‑71 TAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAA > 1:3822770/1‑62 TAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACC > 1:1657880/1‑51 TAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATT > 1:2163289/1‑42 TAACGCCCAGTTAAGACTCGGTGTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG > 1:4718676/1‑71 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGC > 1:4737656/1‑71 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGC > 1:152499/1‑71 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG > 1:2024480/1‑70 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG > 1:1555164/1‑70 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTC < 1:767566/69‑1 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTT > 1:4521112/1‑52 AACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATT < 1:3355281/41‑1 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:5052406/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:4431482/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:4657260/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:4577404/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:4279067/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT > 1:4257319/1‑71 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT < 1:2141902/71‑1 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT < 1:2257377/71‑1 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCT < 1:3246705/71‑1 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCG < 1:1816501/69‑1 ACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGG > 1:1017750/1‑43 CGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCTG < 1:2277580/71‑1 CGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAA < 1:4369397/59‑1 CGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCT < 1:2999437/53‑1 CGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTG > 1:3215293/1‑51 TATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAGCCGAAGGGAAACCGAGTCTTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/226329‑226403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttaacGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTTGCTACAGAATATAAGTCGCTG < W3110S.gb/226408‑226339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |