| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1818339 | 67 (1.190) | 5 (0.100) | 3/92 | NT | 6.9% | coding (511/750 nt) | chbG | conserved hypothetical protein |
| ? | W3110S.gb | = 1818354 | 75 (1.480) | coding (496/750 nt) | chbG | conserved hypothetical protein | |||||
ATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1818265‑1818339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcactACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGA < W3110S.gb/1818354‑1818287 ATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG < 1:3165311/71‑1ATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG < 1:1647908/71‑1ATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG < 1:2179584/71‑1 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGC < 1:3128873/71‑1 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGC < 1:2011054/71‑1 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGC < 1:4978430/71‑1 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:4989298/1‑70 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:4799886/1‑70 TCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:2859747/1‑70 ACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAC < 1:4128219/71‑1 ACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAC > 1:3578558/1‑71 ACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAC < 1:695133/71‑1 GCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAC > 1:2881242/1‑58 CATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCA > 1:4545714/1‑53 CAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTACCCAGGGATTCAGCAGTG > 1:1801005/1‑70 CAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTACCCAGGGATTCAGCAGTG > 1:5032487/1‑70 CAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTACCCAGGGATTCAGCAGT > 1:2413909/1‑69 GCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGC < 1:716543/40‑1 GCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:3424024/1‑39 GCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:4689430/1‑39 GCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATG > 1:2874871/1‑39 AGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTACCCAGGGATTCAGCAGTG < 1:3112368/60‑1 GAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTACCCAGGGATTCAGCAGTGCA > 1:3811392/1‑60 ACTACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGA > 1:1413192/1‑71 ACTACCCAGGGATTCAGCAGTGCATTCTAAGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGA > 1:1800840/1‑71 CTACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCT < 1:1416556/67‑1 TACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCC > 1:1498934/1‑56 ATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1818265‑1818339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcactACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGA < W3110S.gb/1818354‑1818287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |