| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3614559 = | 72 (1.280) | 3 (0.060) | 3/92 | NT | 4.5% | coding (178/270 nt) | tatA | TatABCE protein translocation system subunit |
| ? | W3110S.gb | 3614585 = | 62 (1.220) | coding (152/270 nt) | tatA | TatABCE protein translocation system subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3614632‑3614559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttaTCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAACCG > W3110S.gb/3614585‑3614653 GATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT < 1:5165437/70‑1GATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT < 1:3397495/70‑1 ATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTT < 1:1337298/71‑1 ATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTT > 1:4885992/1‑71 ATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT < 1:2243991/69‑1 AAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTA < 1:3800569/70‑1 GCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT < 1:3325246/62‑1 TAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTT < 1:2123158/61‑1 TAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT > 1:3118282/1‑58 ATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTT > 1:1251961/1‑50 TGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGAT > 1:3494367/1‑47 ATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTT < 1:4704882/43‑1 TAAAACCAGTCAGGATGCTGATTTTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTT > 1:1538367/1‑70 AAACCAGTCAGGATGCTGATTTTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAG > 1:153541/1‑63 AAACCAGTCAGGATGCTGATTTTATCCTGCTTTGGTTCATCATCGCTCATTGCTT < 1:1468340/55‑1 TTTTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGC < 1:538694/45‑1 TTTTATCCTGCTTTGGTTCATCATCGCTCATTGCTT < 1:4512831/36‑1 TTTTATCCTGCTTTGGTTCATCATCGCTCATTGCT < 1:2650312/35‑1 TTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAAC > 1:958264/1‑70 TTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAAC > 1:4352536/1‑70 TTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACAAAGATCGGAACC > 1:4500008/1‑71 TTATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTA > 1:2132247/1‑39 TATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAACC < 1:3864084/70‑1 TATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAACC < 1:3214428/70‑1 ATCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAACCG < 1:2866212/70‑1 GATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3614632‑3614559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttaTCCTGCTTTGGTTCATCATCGCTCATTGCTTTTTTAAAGCCTTTGATCGACGCACCAAGATCGGAACCG > W3110S.gb/3614585‑3614653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |