| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 827256 | 48 (0.850) | 3 (0.060) | 3/92 | NT | 6.0% | coding (419/1134 nt) | ybhS | predicted transporter subunit |
| ? | W3110S.gb | = 827272 | 50 (0.990) | coding (403/1134 nt) | ybhS | predicted transporter subunit | |||||
TTCAAAAGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGTTGGC > W3110S.gb/827189‑827326 | ttCAAAAGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCt < 1:2634851/71‑1 (MQ=255)ttCAAAAGTCTCCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCt > 1:2817992/1‑71 (MQ=255) cAAAAGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTg > 1:907320/1‑70 (MQ=255) cAAAAGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTg > 1:4102203/1‑70 (MQ=255) aaaGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTa > 1:3946935/1‑70 (MQ=255) aGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACa > 1:1399526/1‑70 (MQ=255) aGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACa > 1:2524905/1‑70 (MQ=255) gTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACa > 1:48342/1‑69 (MQ=255) ccGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAg < 1:4357371/66‑1 (MQ=255) cGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTTGCg > 1:2988586‑M2/1‑70 (MQ=255) gTTGTCCTCCGCTCGCTGGATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCgg < 1:2237558‑M2/71‑3 (MQ=255) ttGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCgctaactttgtacaggggt < 1:3338730‑M1/71‑20 (MQ=255) ttGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCgg < 1:902494‑M2/70‑3 (MQ=255) cctccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGAGATACCCCTGTACAAAGTTAGCGGTATTc > 1:5065927/1‑71 (MQ=255) ctccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCggta < 1:4524283‑M2/67‑5 (MQ=255) tccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCgctaactttgtacaggg < 1:4310253‑M1/63‑18 (MQ=255) tccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGtt < 1:3820639/59‑1 (MQ=255) tccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAg < 1:4368071/61‑1 (MQ=255) tccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAg < 1:3516593/61‑1 (MQ=255) ccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATAccc > 1:4623843/1‑46 (MQ=255) ccGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTAtt > 1:1560589/1‑67 (MQ=255) cgctcgctGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCt > 1:4319638/1‑71 (MQ=255) tcgctGCATTTGCCAGATCTGCCAGATCCCTTCGACATAccc > 1:2594949/1‑42 (MQ=255) cgctGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAg > 1:3921992/1‑51 (MQ=255) tGCATTTGCCAGATCTGCCAGATCCCATCGACATACCCCTGTACAAAGTTAGCGGTATTCgg < 1:4782767/62‑1 (MQ=255) gCATTTGCCAGATCTGCCAGATCACTTCGACATACCCCTGTACAAAGTTAGCGGTATTAGGCTCACTGCCg > 1:1523149/1‑71 (MQ=255) cATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGt > 1:489739/1‑71 (MQ=255) aTTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTc > 1:1691342/1‑71 (MQ=255) tgccagatctgccagatcCCTTCGACATACCCCTGTACaaa > 1:4343421/1‑41 (MQ=255) tgccagatctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGc > 1:5188546/1‑47 (MQ=255) tgccagatctgacagatcCCTTCGACATACCCCTGTACAAAGTTAGCggtaa < 1:1114000‑M2/52‑6 (MQ=255) agatctgccagatcCCTTCGACATACCgctaactttgtacaggg > 1:1791062‑M1/1‑27 (MQ=255) agatctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGt < 1:3574621/67‑1 (MQ=255) agatctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGAt > 1:2916711/1‑70 (MQ=255) atctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGc > 1:1408200/1‑58 (MQ=255) tctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCAcc > 1:2999230/1‑71 (MQ=255) ctgccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCa > 1:2221041/1‑52 (MQ=255) gccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTc > 1:2080051/1‑58 (MQ=255) gccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCg > 1:53564/1‑59 (MQ=255) ccagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGa < 1:1712885/70‑1 (MQ=255) cagatcCCTTCGACATACCCCTGTACAAAGTTAGc > 1:2364647/1‑35 (MQ=255) cagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAAt > 1:2970801/1‑71 (MQ=255) cagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAAt < 1:4066441/71‑1 (MQ=255) cagatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAAt < 1:1974636/71‑1 (MQ=255) agatcCCTTCGAGATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATc > 1:1497309/1‑71 (MQ=255) agatcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTTgg > 1:1723727/1‑57 (MQ=255) gatcCCTTCGACATACCCCTGTACAAAGTTAGCggta > 1:1312646‑M2/1‑33 (MQ=255) atcCCTTCGACATACCCCTGTAGAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCa > 1:3379217/1‑61 (MQ=255) atcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCa < 1:4306814/45‑1 (MQ=255) atcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCAc > 1:1190561/1‑46 (MQ=255) atcCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGt < 1:4859753/52‑1 (MQ=255) cTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcg > 1:1675573/1‑71 (MQ=255) cTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcg < 1:297417/71‑1 (MQ=255) ttCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcgg > 1:4609001/1‑71 (MQ=255) tCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCa > 1:3812105/1‑39 (MQ=255) tCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcggt > 1:2567289/1‑71 (MQ=255) tCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcggt > 1:3092498/1‑71 (MQ=255) tCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcggt > 1:4843032/1‑71 (MQ=255) cGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcggtg > 1:4786950/1‑71 (MQ=255) cGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcggtg > 1:3035202/1‑71 (MQ=255) cGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcgg < 1:4653661/69‑1 (MQ=255) cGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATcggtgcgg < 1:5139708/69‑1 (MQ=255) gACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCC‑TCGGTGATCACCTGAATCGGTGCGGTGGc > 1:2437726/1‑71 (MQ=255) ttaCCgctaactttgtacaggggtatgtcgaagggatctgtcagatctggca < 1:1114000‑M1/51‑48 (MQ=255) aTACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGt < 1:1461796/71‑1 (MQ=255) aTACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGt < 1:4244501/71‑1 (MQ=255) tACCgctaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggag < 1:4524283‑M1/67‑64 (MQ=255) tACCgctaactttgtacaggggtatgtcgaagggatc > 1:1312646‑M1/1‑4 (MQ=255) tACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTc < 1:3601055/41‑1 (MQ=255) aCCCCTGTACAAAGTTAGCggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggaggacaa < 1:3338730‑M2/71‑53 (MQ=255) aCCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGTTg > 1:1384660/1‑71 (MQ=255) ccgctaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggaggacaa < 1:902494‑M1/70‑69 (MQ=255) ccgctaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatccagcgagcggaggacaac < 1:2237558‑M1/71‑70 (MQ=255) cgcaaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggaggacaacg > 1:2988586‑M1/1‑1 (MQ=255) cccTGTACAAAGTTAGCggtatgtcgaagggatctggcagatctggcaaatgcagcgagcgga < 1:4310253‑M2/63‑47 (MQ=255) cccTGTACAAAGTTAGCggtatgtcgaagggatctggcagatct > 1:1791062‑M2/1‑17 (MQ=255) cccTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGTTGgc < 1:3485310/71‑1 (MQ=255) | TTCAAAAGTCTGCCCGTTGTCCTCCGCTCGCTGCATTTGCCAGATCTGCCAGATCCCTTCGACATACCCCTGTACAAAGTTAGCGGTATTCGGCTCACTGCCGTCGGTGATCACCTGAATCGGTGCGGTGGCGTTGGC > W3110S.gb/827189‑827326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |