| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1455472 | 57 (1.010) | 4 (0.080) | 3/96 | NT | 7.6% | intergenic (‑116/‑169) | maoC/paaA | fused aldehyde dehydrogenase and enoyl‑CoA hydratase/predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation |
| ? | W3110S.gb | = 1455497 | 43 (0.810) | intergenic (‑141/‑144) | maoC/paaA | fused aldehyde dehydrogenase and enoyl‑CoA hydratase/predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | |||||
GCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACA > W3110S.gb/1455403‑1455541 | gcgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGaaaa < 1:3035810/71‑1 (MQ=255)gcgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGaaaa > 1:1821562/1‑71 (MQ=255)gcgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAA < 1:2569664‑M1/70‑1 (MQ=255) aaTCATAAAAAGCAAATGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAt < 1:2640103/71‑1 (MQ=255) aTCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAtt < 1:3666564/71‑1 (MQ=255) aTCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAtt < 1:1052899/71‑1 (MQ=255) aTCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAtt < 1:4289365/71‑1 (MQ=255) tCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAtt > 1:1013957/1‑70 (MQ=255) tCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAt > 1:1379076/1‑69 (MQ=255) tCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTa < 1:4619163/71‑1 (MQ=255) cATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTa < 1:4645994/70‑1 (MQ=255) aTAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTaa < 1:4517465/70‑1 (MQ=255) aaaaaGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATg > 1:1631456/1‑70 (MQ=255) aaaaaGCAAAGGATCTGTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATg > 1:1793773/1‑70 (MQ=255) gCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGa < 1:3466757/71‑1 (MQ=255) aaGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAacattatttatcagtgca > 1:2104784‑M1/1‑53 (MQ=255) aaGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGata > 1:2787218/1‑70 (MQ=255) ggATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTaa > 1:3622758/1‑58 (MQ=255) gATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAAt > 1:1321927/1‑58 (MQ=255) ttttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACAtt < 1:4027221/51‑1 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAtcattatttatcagtgcattaatgtt < 1:647153‑M1/70‑27 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAacattatttatcagtgcattaatgtt < 1:303227‑M1/70‑27 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataaataa < 1:4216478/66‑1 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATg < 1:3560025/68‑1 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATg < 1:4602578/68‑1 (MQ=255) ttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATg < 1:2856816/68‑1 (MQ=255) tAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGc > 1:2412533/1‑53 (MQ=255) tAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGAtt < 1:2829579‑M2/70‑3 (MQ=255) tAACGAAATGTTAACTATGCGATCTGTATAG‑AACTGCGGAAAACATTAATGCACTGATAAATAATGATTta > 1:3762925/1‑71 (MQ=255) cGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTg < 1:2403879/54‑1 (MQ=255) cGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTg < 1:554588/54‑1 (MQ=255) cGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTtat > 1:4043889/1‑70 (MQ=255) aaaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataa < 1:466372/56‑1 (MQ=255) aaaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataa < 1:2952898/56‑1 (MQ=255) aaaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataa < 1:2881511/56‑1 (MQ=255) aaaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATg > 1:4061384/1‑62 (MQ=255) aaaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGa > 1:3458546/1‑63 (MQ=255) aaTGTTAACTATGCGATCTGTATGGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaa > 1:65153/1‑70 (MQ=255) aaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGAtt < 1:1070362‑M2/64‑3 (MQ=255) aaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaa > 1:791618/1‑70 (MQ=255) aaTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaa > 1:5004416/1‑70 (MQ=255) aTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCAc > 1:2816511/1‑48 (MQ=255) aTGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaaaa < 1:3788939/71‑1 (MQ=255) ttAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataa < 1:5042141/51‑1 (MQ=255) tAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATa < 1:1032150/69‑1 (MQ=255) aCTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAaataat < 1:2297820/53‑1 (MQ=255) aCTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGt < 1:3518341/71‑1 (MQ=255) tGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGc < 1:915921/69‑1 (MQ=255) gCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATa > 1:165743/1‑62 (MQ=255) cGATCTGTATAGCAACTGCGGAAAAGATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGaaa < 1:4501974/71‑1 (MQ=255) gATCTGTATAGCAACTGCGGAAAtcattatttatcagtgc < 1:4425051‑M1/40‑18 (MQ=255) gATCTGTATAGCAACTGCGGAAAACATTAATGCACTGataaat < 1:3214137/43‑1 (MQ=255) gATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGaaa < 1:323602/70‑1 (MQ=255) aTCTGTATAGCAACTGCGGAAAACATTAATGCACTGataa < 1:2972110/40‑1 (MQ=255) cTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaaaa > 1:2171677/1‑55 (MQ=255) tGTATAGCAACTGCGGAAAACATTAATGCACTGataaata > 1:4736035/1‑40 (MQ=255) tGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCg > 1:2792515/1‑70 (MQ=255) gTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaaaa < 1:1293457/53‑1 (MQ=255) tataGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAAt < 1:2183347/65‑1 (MQ=255) tataGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca > 1:3837205/1‑71 (MQ=255) ataGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaa < 1:4095034/49‑1 (MQ=255) ataGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATa > 1:4277840/1‑53 (MQ=255) taGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca > 1:2999670/1‑69 (MQ=255) aaCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca < 1:1401299/65‑1 (MQ=255) aaCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca < 1:4580460/65‑1 (MQ=255) aaCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca < 1:4586545/65‑1 (MQ=255) aaCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTc < 1:311383/71‑1 (MQ=255) aCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATaaaaa < 1:3457061/45‑1 (MQ=255) cTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGt < 1:3484813/61‑1 (MQ=255) cTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCaa < 1:1872521/71‑1 (MQ=255) tGCGGAAAACATTAATGCTCTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCaa < 1:2230107/70‑1 (MQ=255) cGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTc < 1:2305613/59‑1 (MQ=255) cGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACa < 1:2861597/71‑1 (MQ=255) aatcattatttatcagtgcattaatgttttccgcagttgctatacagatcgcatagttaacatttcgtta < 1:2829579‑M1/70‑69 (MQ=255) aatcattatttatcagtgcattaatgttttccgcagttgctatacagatcgcatagttaacatt < 1:1070362‑M1/64‑63 (MQ=255) aaCATTAATGCACTGATAAATAATGTtttccgcagttgctatacagatcgcatagttaacatttcgttaa < 1:303227‑M2/70‑45 (MQ=255) aaCATTAATGCACTGATAAATAATGAtttccgcagttgctatacagatcgcatagttaacatttcgttaa < 1:647153‑M2/70‑45 (MQ=255) aaCATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACa > 1:3943202/1‑70 (MQ=255) | GCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACA > W3110S.gb/1455403‑1455541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |