| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2358808 = | 64 (1.140) | 3 (0.060) | 3/88 | NT | 5.7% | coding (1492/1629 nt) | glpA | sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding |
| ? | W3110S.gb | 2358839 = | 44 (0.910) | coding (1523/1629 nt) | glpA | sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)‑binding | |||||
TGCGCCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGAAAG > W3110S.gb/2358739‑2358878 | tGCGCCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACt > 1:3931274/1‑71 (MQ=255) cgcCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt > 1:1075603/1‑71 (MQ=255) cgcCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt < 1:3371242/71‑1 (MQ=255) cgcCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt > 1:4242935/1‑71 (MQ=255) cgcCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt > 1:2828219/1‑71 (MQ=255) cgcCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt > 1:820066/1‑71 (MQ=255) cctgataaacccagcgggtaaattcgctttcgcgcagtgcatctccccaggcgatgggttgcacgcCTTTc > 1:2965896‑M1/67‑71 (MQ=255) cctgataaacccagcgggtaaattcgctttcgcgcagtgcatctccccaggcgatgggttgcacgcCTTTc < 1:2692718‑M1/5‑1 (MQ=255) tgataaacccagcgggtaaattcgctttcgcgcagtgcatctccccaggcgatgggttgcacgcCtt > 1:729689‑M1/65‑67 (MQ=255) tGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTcc < 1:193567/69‑1 (MQ=255) gCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCTAGCAACTTTCCa > 1:1360069/1‑69 (MQ=255) gCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCa > 1:3054374/1‑69 (MQ=255) gCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCa > 1:4230607/1‑69 (MQ=255) gCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAcc > 1:3822689/1‑71 (MQ=255) gcgcTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttc > 1:1718487/1‑71 (MQ=255) cTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcct > 1:1270553/1‑70 (MQ=255) agcgggtaaattcgctttcgcgcagtgcatctccccaggcgatgggttgcacgcCTTTCCa < 1:1217267‑M1/7‑1 (MQ=255) gACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTaacgaa < 1:4176596/71‑1 (MQ=255) tgctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcctt < 1:3600304/62‑1 (MQ=255) tgctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcctt < 1:1793138/62‑1 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCa > 1:504551/1‑52 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCa > 1:156281/1‑52 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcc > 1:1254237/1‑58 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcc > 1:3289978/1‑58 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTaa > 1:3710546/1‑62 (MQ=255) ctgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCt < 1:4147951/70‑1 (MQ=255) tgcAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACttt < 1:2024362/48‑1 (MQ=255) cAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTcc > 1:1000892/1‑48 (MQ=255) cAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTaacgaacg < 1:3143879/65‑1 (MQ=255) aaCGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTgg > 1:4364324/1‑68 (MQ=255) aaCGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGa > 1:4973684/1‑69 (MQ=255) aCGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTaacgaac > 1:4821633/1‑62 (MQ=255) aCGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAg > 1:393092/1‑71 (MQ=255) cGTTTTAACGTCAGGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttcc > 1:4862321/1‑52 (MQ=255) cGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAgg > 1:531837/1‑71 (MQ=255) cGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAg > 1:2574913/1‑70 (MQ=255) ttAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTg > 1:4096464/1‑71 (MQ=255) tAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGc < 1:689798/67‑1 (MQ=255) tAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTg < 1:2820285/70‑1 (MQ=255) gcagtgcatctccccaggcgatgggttgcacgcCTTTCCACCTTCCTTAACGAACGCTgg > 1:4571193‑M1/34‑60 (MQ=255) aaCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAcct < 1:2502613/43‑1 (MQ=255) aaCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGc > 1:1275097/1‑70 (MQ=255) aaCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGc > 1:1575543/1‑70 (MQ=255) aaCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGc > 1:2243993/1‑70 (MQ=255) aCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAcct < 1:2596031/42‑1 (MQ=255) aCGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCaa > 1:2061431/1‑71 (MQ=255) cGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAccttc > 1:4213447/1‑43 (MQ=255) cGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTg > 1:7667/1‑57 (MQ=255) gtgcatctccccaggcgatgggttgcacgcCTTTc > 1:2141014‑M1/31‑35 (MQ=255) gTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTaa > 1:571950/1‑47 (MQ=255) gTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAAcc < 1:4096238/71‑1 (MQ=255) tCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAcc > 1:4785340/1‑38 (MQ=255) tCACGACGTCCGCGCAATCTATCGAGCAACTTTCCAcc > 1:149944/1‑38 (MQ=255) cACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCa > 1:358544/1‑71 (MQ=255) acgacgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGaaa > 1:3628633/1‑57 (MQ=255) acgacgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCAt > 1:1962579/1‑71 (MQ=255) cgacgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTTCAACCCATc > 1:3308615/1‑71 (MQ=255) cgacgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTTCAACCCATc < 1:3148513/71‑1 (MQ=255) cgacgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATc < 1:3134704/71‑1 (MQ=255) gacgTCCGCGCAATCTATCGAGCAACTTACCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCa > 1:830003/1‑68 (MQ=255) acgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGc > 1:4979535/1‑71 (MQ=255) cgTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAg > 1:3659890/1‑54 (MQ=255) tCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTg < 1:783071/71‑1 (MQ=255) ccGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTgg > 1:3438270/1‑71 (MQ=255) aggcgatgggttgcacgcCTTTCCACCTTCCTTAACGAACGCTGGaaa < 1:3166511‑M1/30‑1 (MQ=255) cgcAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCAt > 1:4923222/1‑61 (MQ=255) cgcAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGga < 1:309870/71‑1 (MQ=255) cgcAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGga < 1:4902310/71‑1 (MQ=255) cAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCaa > 1:3116902/1‑54 (MQ=255) aaTCTATCGAGCAACTTTCCACCTTCCTTaacgaacg < 1:699561/37‑1 (MQ=255) tgggttgcacgcCTTTCCACCTTCCTTAACGAACGCTGGaa < 1:2022645‑M1/29‑1 (MQ=255) tCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGa < 1:1677325/40‑1 (MQ=255) tCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATg > 1:4329244/1‑70 (MQ=255) tATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAAccc < 1:3232561/52‑1 (MQ=255) tATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCAc > 1:1269491/1‑71 (MQ=255) tCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGgaga < 1:3716700/64‑1 (MQ=255) tCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGgaga > 1:2528980/1‑64 (MQ=255) tCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACt > 1:903373/1‑70 (MQ=255) gAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTgcg > 1:19720/1‑71 (MQ=255) aGCAACTTTCCACCTTCCTTAAAGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTgcgc < 1:23578/71‑1 (MQ=255) gCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCAt > 1:3891192/1‑48 (MQ=255) cAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGa < 1:639111/71‑1 (MQ=255) cAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGa < 1:1978250/71‑1 (MQ=255) cAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGa < 1:2123889/71‑1 (MQ=255) CTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGAAAg < 1:4698728‑M1/71‑1 (MQ=255) | TGCGCCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGAAAG > W3110S.gb/2358739‑2358878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |