| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3325155 = | 81 (1.440) | 4 (0.080) | 3/90 | NT | 5.3% | coding (1636/1935 nt) | ftsH | protease, ATP‑dependent zinc‑metallo |
| ? | W3110S.gb | 3325178 = | 71 (1.430) | coding (1613/1935 nt) | ftsH | protease, ATP‑dependent zinc‑metallo | |||||
Only 100 of 132 total aligned reads displayed.
TCCATATTGTCGGTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACTT > W3110S.gb/3325085‑3325220 | cactgctgtacgcggaagaagaaggtgaagtgttcctcggccgtagcgtagcgaaagcgaaacatatgtcc < 1:3400181‑M1/1‑1 (MQ=255) ctgctgtacgcggaagaagaaggtgaagtgttcctcggccgtagcgtagcgaaagcgaaacatatgtcCga < 1:3530583‑M1/3‑1 (MQ=255) cATATTGTCGGTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCG < 1:4019879‑M1/70‑1 (MQ=255) tgctgtacgcggaagaagaaggtgaagtgttcctcggccgtagcgtagcgaaagcgaaacatatgtcCgat < 1:1212513‑M1/4‑1 (MQ=255) gctgtacgcggaagaagaaggtgaagtgttcctcggccgtagcgtagcgaaagcgaaacatatgtcCgat < 1:261137‑M1/4‑1 (MQ=255) ttGTCGGTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGA > 1:767660‑M1/1‑70 (MQ=255) tCGGTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACg < 1:4831807/71‑1 (MQ=255) ggTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTg > 1:187608/1‑71 (MQ=255) ggTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGA < 1:2102444‑M1/65‑1 (MQ=255) gTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTg > 1:2928760/1‑70 (MQ=255) tCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGAT < 1:5049718‑M1/61‑1 (MQ=255) cAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAg > 1:1997215/1‑71 (MQ=255) cAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGA > 1:4061996‑M1/1‑59 (MQ=255) aGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGt > 1:3160755/1‑71 (MQ=255) gAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGtt < 1:5000661/71‑1 (MQ=255) aGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGAaactgcacgtat > 1:40716‑M1/1‑58 (MQ=255) aGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGAaactgcacgtat > 1:3429663‑M1/1‑58 (MQ=255) aGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTt > 1:2422112‑M2/1‑69 (MQ=255) aGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTt < 1:4314611‑M2/70‑2 (MQ=255) gCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTtca > 1:62888‑M2/1‑68 (MQ=255) gCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTtca < 1:2119592‑M2/71‑4 (MQ=255) gCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCAGGTCGATGATACGTGCAGTTtca < 1:1164997‑M2/71‑4 (MQ=255) gCTGACGCGCACGATTATAGTTACGCTCAATCAGCGCTTTCACTTCCTGGTCGATGATACTTGCAGTTtca > 1:618853‑M2/1‑68 (MQ=255) tGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGt < 1:5138462/60‑1 (MQ=255) tGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGt < 1:5052655/60‑1 (MQ=255) gACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGAT < 1:3653857‑M1/52‑1 (MQ=255) aCGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTtcatcg > 1:1448695‑M2/1‑64 (MQ=255) aCGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTtcatcg > 1:4769531‑M2/1‑64 (MQ=255) cgcgCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGA > 1:2245857‑M1/1‑52 (MQ=255) gcgcACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGa > 1:3820069/1‑70 (MQ=255) gaagtgttcctcggccgtagcgtagcgaaagcgaaacatatgtcCg > 1:841993‑M1/45‑46 (MQ=255) cgcACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGAaactgcacgtatcat < 1:3911114‑M1/65‑16 (MQ=255) cACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACata < 1:2216836/71‑1 (MQ=255) cACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACata > 1:3574603/1‑71 (MQ=255) aCGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACatat > 1:3265013/1‑71 (MQ=255) aCGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACata > 1:1673776/1‑70 (MQ=255) aTTATCGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtt < 1:1988479/71‑1 (MQ=255) aTTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGATTCATCGGACATATGtt < 1:4007270/71‑1 (MQ=255) ttATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGAaactgcacgtatcat > 1:2613994‑M1/1‑43 (MQ=255) ttATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGttt > 1:2481587/1‑71 (MQ=255) ataGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTtcat < 1:4309333‑M2/56‑5 (MQ=255) tcggccgtagcgtagcgaaagcgaaacatatgtcCGATGATACGTGc > 1:1230960‑M1/35‑47 (MQ=255) taGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCgatgat < 1:3294023/41‑1 (MQ=255) taGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCgatgat < 1:622630/41‑1 (MQ=255) taGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCgatgat < 1:3842124/41‑1 (MQ=255) ggccgtagcgtagcgaaagcgaaacatatgtcCgatga > 1:1984433‑M1/33‑38 (MQ=255) gTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctt < 1:95511/71‑1 (MQ=255) gTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctt < 1:3128248/71‑1 (MQ=255) gTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgct < 1:2946169/70‑1 (MQ=255) gTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgct < 1:3466989/70‑1 (MQ=255) ttACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGAaactgcacgtatca < 1:2537611‑M1/51‑15 (MQ=255) ttACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATAc < 1:1555434/40‑1 (MQ=255) aCGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcg > 1:2760099/1‑71 (MQ=255) cGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcgc < 1:1149668/71‑1 (MQ=255) gCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctt > 1:4992453/1‑66 (MQ=255) gCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTttcgctttcgct < 1:1096134/71‑1 (MQ=255) gCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTttcgctttcgct < 1:643011/71‑1 (MQ=255) gCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTttcgctttcgct < 1:1231083/71‑1 (MQ=255) tCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcg > 1:2571996/1‑67 (MQ=255) tCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcg > 1:5093720/1‑67 (MQ=255) tCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:3630998/1‑66 (MQ=255) tCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgcta > 1:4575835/1‑70 (MQ=255) cAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:4093866/1‑65 (MQ=255) cAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:4703279/1‑65 (MQ=255) cAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgct > 1:3169089/1‑62 (MQ=255) aaTCAGTACTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:1036120/1‑64 (MQ=255) aTCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:1931412/1‑63 (MQ=255) aTCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgctacgc > 1:2967227/1‑70 (MQ=255) aTCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgctacgc > 1:4623340/1‑70 (MQ=255) gcgaaagcgaaacatatgtcCGATGATACGTGCAGTTTCATc < 1:2592‑M1/22‑1 (MQ=255) cAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcgc < 1:152663/63‑1 (MQ=255) cgaaagcgaaacatatgtcCGATGATACGTGCAGTTTCa > 1:126958‑M1/20‑39 (MQ=255) gTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACgg > 1:4532519/1‑71 (MQ=255) tGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACa > 1:1393693/1‑44 (MQ=255) tGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcgc > 1:4938203/1‑60 (MQ=255) tGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGc > 1:3810842/1‑71 (MQ=255) tGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGc < 1:4948175/71‑1 (MQ=255) gCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGcc > 1:2777851/1‑71 (MQ=255) tttCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgcttt < 1:2369061/54‑1 (MQ=255) tttCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGATACGGcc > 1:2047853/1‑69 (MQ=255) ttCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctt < 1:2775853/52‑1 (MQ=255) tCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAg < 1:177542/70‑1 (MQ=255) tCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAg > 1:3422289/1‑70 (MQ=255) cACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAgg > 1:4265358/1‑70 (MQ=255) ttCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:2384824/1‑49 (MQ=255) ttCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttc > 1:853006/1‑49 (MQ=255) tCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAacac > 1:5092457/1‑71 (MQ=255) ccTGGTCGATGATACGTGCAGTTTCATCGGACATATGttt > 1:2198577/1‑40 (MQ=255) ccTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgcta > 1:128713/1‑51 (MQ=255) ccTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACt > 1:1919985/1‑71 (MQ=255) ccTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACt > 1:169974/1‑71 (MQ=255) cTGGTCGATGATACGTGCAGTTTCATCGGACATATGtttcgctttcgc < 1:832875/48‑1 (MQ=255) cTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgctac < 1:3504062/51‑1 (MQ=255) cTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACtt < 1:107142/71‑1 (MQ=255) cTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACtt > 1:3203742/1‑71 (MQ=255) tGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACtt > 1:1150771/1‑70 (MQ=255) ggTCGATGATACGTGCAGTTTCATCGGACATATGttt > 1:3198794/1‑37 (MQ=255) ggTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTcgctactcta > 1:2041237/1‑53 (MQ=255) CGATGATACGTGCAGTTTCATCGGACATATGtttc < 1:4808063‑M1/35‑1 (MQ=255) CGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGaa < 1:1028334‑M1/61‑1 (MQ=255) | TCCATATTGTCGGTCAGAAGCTGACGCGCACGATTATAGTTACGCTCAATCAGTGCTTTCACTTCCTGGTCGATGATACGTGCAGTTTCATCGGACATATGTTTCGCTTTCGCTACGCTACGGCCGAGGAACACTT > W3110S.gb/3325085‑3325220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |