| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3332647 | 29 (0.520) | 3 (0.060) | 3/88 | NT | 10.2% | intergenic (‑57/+70) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal subunit protein L27 |
| ? | W3110S.gb | = 3332659 | 28 (0.580) | intergenic (‑69/+58) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal subunit protein L27 | |||||
CTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGACGCGAAAAACT > W3110S.gb/3332582‑3332717 | ctgctTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGtt < 1:1152623/71‑1 (MQ=255)ctgctTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGtt < 1:5028613/71‑1 (MQ=255) ctTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTAt < 1:2559892/70‑1 (MQ=255) tCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCg > 1:587599/1‑70 (MQ=255) tCATACCGTATTCCCTCCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCg > 1:693225/1‑70 (MQ=255) tACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCgg > 1:3208633/1‑61 (MQ=255) tACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATg < 1:4624850‑M2/71‑2 (MQ=255) ccGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgta > 1:4059068‑M2/1‑68 (MQ=255) ccGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgt > 1:1184154‑M2/1‑68 (MQ=255) ccGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATg < 1:1045742‑M2/69‑2 (MQ=255) cGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaa > 1:2413913‑M2/1‑67 (MQ=255) cGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaa > 1:4540295‑M2/1‑67 (MQ=255) cGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaa > 1:1689139‑M2/1‑67 (MQ=255) cGTATTCCCTGCAAAGCGCATTTGAGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaa > 1:1393349‑M2/1‑67 (MQ=255) tATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACattcgataaccggtaaaa < 1:3559839‑M1/71‑19 (MQ=255) ttCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACattcgataaccggtaaaaat < 1:218519‑M1/71‑21 (MQ=255) ttCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAg < 1:2125503/71‑1 (MQ=255) cccTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaaaaa < 1:2840260‑M2/68‑8 (MQ=255) tGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCg > 1:2781018/1‑71 (MQ=255) cAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaaa < 1:193743‑M2/61‑6 (MQ=255) cAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaaa < 1:4847793‑M2/61‑6 (MQ=255) aaGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAAc < 1:3680313/71‑1 (MQ=255) gcgcATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACgt < 1:2041489/71‑1 (MQ=255) gcATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACgtgt < 1:790621/71‑1 (MQ=255) gcATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACgtgt < 1:267289/71‑1 (MQ=255) cATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACgtgt < 1:2631370/70‑1 (MQ=255) tttGCGGATTAACGTCGCACCATGCGCATTTTTAcc < 1:3298865/36‑1 (MQ=255) tttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATc < 1:883674/43‑1 (MQ=255) tttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATc < 1:2628636/43‑1 (MQ=255) tttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgtaaa < 1:2584009‑M2/52‑6 (MQ=255) tttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGc < 1:2247703/71‑1 (MQ=255) ttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGt > 1:270868/1‑38 (MQ=255) ttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGcccc > 1:3926671/1‑58 (MQ=255) ttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCa < 1:2398894/61‑1 (MQ=255) ttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCg > 1:2546379/1‑71 (MQ=255) ttGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCg > 1:3744131/1‑71 (MQ=255) tGCGGATTAACCTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCg < 1:1274078/70‑1 (MQ=255) ggATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATgt > 1:2889747‑M2/1‑42 (MQ=255) gATTAACGTCGCACCATGCGCATTTTTACattcgataaccggtaaaa > 1:2936723‑M1/1‑29 (MQ=255) aTTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGcc > 1:2303633/1‑50 (MQ=255) aTTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCtt > 1:4908110/1‑71 (MQ=255) ttAACGTCGCACCATGCGCATTTTTACCGGTTATAGAATGTAAAAAGCCCCGCAACGTGTTGCg < 1:842918/64‑1 (MQ=255) aCGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCAt > 1:3622749/1‑71 (MQ=255) aCGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCAt < 1:4858618/71‑1 (MQ=255) gCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGt < 1:2392582/70‑1 (MQ=255) cACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTa < 1:2370755/71‑1 (MQ=255) ccATGTGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGc < 1:2897802/42‑1 (MQ=255) aTGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCg < 1:2816854/51‑1 (MQ=255) tGCGCATTTTTACCGGTTATGGAATGTAAAAAGCCCCGCAACGTGtt < 1:2096383/47‑1 (MQ=255) tGCGCATTTTTACCGGTTATCCAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCggg < 1:4802578/71‑1 (MQ=255) aTTTTTACCGGTTATCGAATgtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaa < 1:218519‑M2/71‑52 (MQ=255) tttttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcaggg < 1:2840260‑M1/68‑62 (MQ=255) ttttACCGGTTATCGAATgtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaata < 1:3559839‑M2/71‑54 (MQ=255) ttttACCGGTTATCGAATgtaaaaatgcgcatggtgcgacgttaatc > 1:2936723‑M2/1‑18 (MQ=255) tttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttg < 1:193743‑M1/61‑57 (MQ=255) tttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttg < 1:4847793‑M1/61‑57 (MQ=255) tttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaa < 1:2584009‑M1/52‑48 (MQ=255) tttACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCg > 1:214379/1‑42 (MQ=255) ttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatcctcaaatgcgctttgcagggaatacg > 1:1393349‑M1/1‑4 (MQ=255) ttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacg > 1:1689139‑M1/1‑4 (MQ=255) ttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacg > 1:4540295‑M1/1‑4 (MQ=255) ttACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacg > 1:2413913‑M1/1‑4 (MQ=255) ttACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGACGCGaaa < 1:952381/70‑1 (MQ=255) ttACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGACGCGaaa < 1:3874644/70‑1 (MQ=255) tACattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacgg > 1:4059068‑M1/1‑3 (MQ=255) aCattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacgg > 1:1184154‑M1/1‑2 (MQ=255) aCattcgataaccggtaaaaatgcgcatggtgcgacgttaatcc > 1:2889747‑M1/1‑2 (MQ=255) cattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacggta < 1:4624850‑M1/71‑71 (MQ=255) cattcgataaccggtaaaaatgcgcatggtgcgacgttaatccgcaaatgcgctttgcagggaatacgg < 1:1045742‑M1/69‑69 (MQ=255) | CTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGACGCGAAAAACT > W3110S.gb/3332582‑3332717 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |