| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3985587 = | 80 (1.420) | 5 (0.100) | 5/90 | NT | 7.5% | coding (148/531 nt) | yhiF | predicted DNA‑binding ranscriptional regulator |
| ? | W3110S.gb | 3985608 = | 52 (1.050) | coding (127/531 nt) | yhiF | predicted DNA‑binding ranscriptional regulator | |||||
Only 100 of 119 total aligned reads displayed.
GAGAAAATAATGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGTATA > W3110S.gb/3985517‑3985657 | agtaaaggtaatgtcgttcatatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgt > 1:2946680‑M1/71‑71 (MQ=255)agtaaaggtaatgtcgttcatatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgt < 1:139106‑M1/1‑1 (MQ=255) aaaaTAATGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACattatt < 1:591947/68‑1 (MQ=255) aaggtaatgtcgttcatatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCAtt > 1:3211908‑M1/67‑71 (MQ=255) aaaTAATGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCAt > 1:377486/1‑70 (MQ=255) aggtaatgtcgttcatatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCATTa < 1:2109446‑M1/6‑1 (MQ=255) aataatGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCAtt > 1:314404/1‑70 (MQ=255) aataatGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCAtt > 1:104090/1‑70 (MQ=255) aataatGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCAtt > 1:2819231/1‑70 (MQ=255) atGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATg > 1:352999/1‑70 (MQ=255) tGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTa > 1:121009/1‑71 (MQ=255) cgttcaaatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCATTAATGTATCaa < 1:661148‑M1/15‑1 (MQ=255) aTGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaa > 1:1526577/1‑71 (MQ=255) tGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaat < 1:2753227/71‑1 (MQ=255) gttcatatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgt < 1:4970668‑M1/1‑1 (MQ=255) catatacagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCATTAATGTATCaataa > 1:3759451‑M1/53‑70 (MQ=255) aCAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaata < 1:159314/69‑1 (MQ=255) cAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaataat > 1:2484925/1‑70 (MQ=255) gTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGAc > 1:555475/1‑70 (MQ=255) gTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACg < 1:1792782/71‑1 (MQ=255) gTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACg < 1:230216/71‑1 (MQ=255) acagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCATTAATGTATCAATAATGACg < 1:2051085‑M1/23‑1 (MQ=255) tttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTaa > 1:2277516/1‑53 (MQ=255) tttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGAc > 1:18903/1‑68 (MQ=255) tttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGAc > 1:1497255/1‑68 (MQ=255) tttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACg > 1:3850372/1‑69 (MQ=255) tttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACg > 1:4960432/1‑69 (MQ=255) cagaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTc > 1:5115974‑M1/47‑48 (MQ=255) ttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCa > 1:958022/1‑48 (MQ=255) ttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCa > 1:3408318/1‑48 (MQ=255) ttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTAt < 1:2894294/57‑1 (MQ=255) ttAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAg > 1:1977858/1‑71 (MQ=255) tAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaataat > 1:3980061/1‑63 (MQ=255) gaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCAt < 1:2866613‑M1/4‑1 (MQ=255) gaacgaagaagagatcgacgtaatgttgcatcagaatgccttcgTCAt < 1:3621711‑M1/4‑1 (MQ=255) cGTTCAATTTGAGTGAGAAAATTAGAATGAAATACattatt > 1:5117348/1‑41 (MQ=255) gTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTaa > 1:4911760/1‑46 (MQ=255) gTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTaa < 1:1565412/46‑1 (MQ=255) aagaagagatcgacgtaatgttgcatcagaatgccttcgTCa < 1:3625663‑M1/3‑1 (MQ=255) ttCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaat < 1:4340533/54‑1 (MQ=255) ttCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCt < 1:4597489/71‑1 (MQ=255) tCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATg < 1:5108247/57‑1 (MQ=255) tCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCt > 1:4229835/1‑70 (MQ=255) cAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTa < 1:1693745/42‑1 (MQ=255) cAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaataat < 1:4764856/55‑1 (MQ=255) cAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTg < 1:4117632/70‑1 (MQ=255) cAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTg < 1:606057/70‑1 (MQ=255) cAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTg < 1:3136515/70‑1 (MQ=255) aaTTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCaata > 1:5116313/1‑52 (MQ=255) gagatcgacgtaatgttgcatcagaatgccttcgTCATTAATGTATCAATAATGACg < 1:4431387‑M1/23‑1 (MQ=255) tttGAGTGAGAAAATTAGAATGAAATACATTATTCAtt < 1:68656/38‑1 (MQ=255) tttGAGTGAGAAAATTAGAATGAAATACATTATTCAtt < 1:3529618/38‑1 (MQ=255) tttGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATg > 1:2478248/1‑70 (MQ=255) ttGAGTGAGAAAATTAGAATGAAATACATTATTCa > 1:3058579/1‑35 (MQ=255) ttGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAg > 1:4164722/1‑58 (MQ=255) ttGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGa > 1:36833/1‑67 (MQ=255) tgagtgagAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCaa > 1:93221/1‑71 (MQ=255) atcgacgtaatgttgcatcagaatgccttcgTCAt > 1:5097138‑M1/32‑35 (MQ=255) gtgagAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACa > 1:4068936/1‑70 (MQ=255) tgagAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGAc > 1:3831641/1‑49 (MQ=255) agaAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCaa > 1:317116/1‑65 (MQ=255) agaAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAAc > 1:3192228/1‑66 (MQ=255) gaAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACg > 1:1093520/1‑71 (MQ=255) aaaaTTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGaa > 1:4001863/1‑48 (MQ=255) aaaaTTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGaa > 1:2249737/1‑48 (MQ=255) aaaaTTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGa < 1:4685893/47‑1 (MQ=255) aaaTTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTc < 1:3185947/71‑1 (MQ=255) aaTTATAATGAATTACATTATTCATTAATGTATCaata < 1:851653/38‑1 (MQ=38) gttgcatcagaatgccttcgTCATTAATGTATCaata > 1:4350478‑M1/21‑37 (MQ=255) ttAGAATGAAATACATTATTCATTAATGTATCAATAATg < 1:1218009/39‑1 (MQ=255) tAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAtc > 1:3752703/1‑71 (MQ=255) tAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAtc > 1:533143/1‑71 (MQ=255) aGAATGAAATACATTATTCATTAATGTATCAATAATGACGa > 1:3978270/1‑41 (MQ=255) aGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAtct > 1:3584521/1‑71 (MQ=255) aaTGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATctct > 1:4224982/1‑71 (MQ=255) aTGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAtc < 1:3076371/67‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGa < 1:3204754/46‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCg < 1:3844196/61‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAtctc < 1:2225400/66‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCtcttct < 1:1760389/70‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTcttctt < 1:1927337/71‑1 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTATGATGCAACATTACGTCGATCTcttctt > 1:3095498/1‑71 (MQ=255) aaaTACATTATTCATTAATGTATCAATAATCACGAAGGCATTCTGATGCAACATTACGTCg < 1:1629028/61‑1 (MQ=255) aaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGa > 1:4112598/1‑45 (MQ=255) aaTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGAt > 1:4644387/1‑46 (MQ=255) aTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCt < 1:921181/42‑1 (MQ=255) aTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTcttctt < 1:2615824/69‑1 (MQ=255) aTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCg < 1:1674224/71‑1 (MQ=255) aTACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCg < 1:903040/71‑1 (MQ=255) cATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAAc < 1:2599576/47‑1 (MQ=255) cATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTc > 1:2351906/1‑71 (MQ=255) cATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTc > 1:3065641/1‑71 (MQ=255) attattCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCt < 1:3371221/71‑1 (MQ=255) ttattCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGt < 1:2121482/52‑1 (MQ=255) attCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGAt > 1:1745799/1‑54 (MQ=255) ttCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGtat < 1:2555913/71‑1 (MQ=255) ttCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGtat < 1:1321921/71‑1 (MQ=255) ttCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGta < 1:65391/70‑1 (MQ=255) ttCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGt < 1:4513574/69‑1 (MQ=255) TCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGtata < 1:5092306‑M1/71‑1 (MQ=255) | GAGAAAATAATGACATGGACAGGTTTTAATCGTTCAATTTGAGTGAGAAAATTAGAATGAAATACATTATTCATTAATGTATCAATAATGACGAAGGCATTCTGATGCAACATTACGTCGATCTCTTCTTCGTTCTGTATA > W3110S.gb/3985517‑3985657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |