| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4205007 = | 48 (0.850) | 3 (0.060) | 3/96 | NT | 6.1% | coding (205/1290 nt) | rsmB | 16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent |
| ? | W3110S.gb | 4205038 = | 47 (0.890) | coding (174/1290 nt) | rsmB | 16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent | |||||
TATAAAGCAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGCACAACTC > W3110S.gb/4204941‑4205076 | tccgataaagacaaagcacttcttcaagagttgtgcttttgcgtactgcgtacgctttcgcagttaGAc < 1:2156930‑M1/3‑1 (MQ=255) aaGCAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGcc < 1:4422711/70‑1 (MQ=255) aaGCAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCa > 1:2383788/1‑71 (MQ=255) aGCAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCAt > 1:2308103/1‑71 (MQ=255) cAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCgg < 1:4970558/60‑1 (MQ=255) aGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTaa > 1:1571895/1‑71 (MQ=255) gTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGAc > 1:2401185/1‑60 (MQ=255) gTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGAc > 1:752296/1‑60 (MQ=255) ttGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCgg < 1:831191/57‑1 (MQ=255) acaaagcacttcttcaagagttgtgctttggcgtactgcgtacgctttcgcagttaGACGGGCCATTAACt < 1:550675‑M1/15‑1 (MQ=255) tGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGcc > 1:462760/1‑63 (MQ=255) gATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACtta > 1:4993842/1‑71 (MQ=255) gATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACtta > 1:2426438/1‑71 (MQ=255) aTACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACttat > 1:3612910/1‑71 (MQ=255) gcacttcttcaagagttgtgctttggcgtactgcgtacgctttcgcagttaGa < 1:3254070‑M1/2‑1 (MQ=255) cAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACttatta < 1:2362777/70‑1 (MQ=255) acttcttcaagagttgtgctttggcgtactgcgtacgctttcgcagttaGa > 1:4720780‑M1/50‑51 (MQ=255) aaaCCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAAt < 1:3151185/71‑1 (MQ=255) cttcttcaagagttgtgctttggcgtactgcgtacgctttcgcagttag > 1:4480873‑M1/49‑49 (MQ=255) accaaccaTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACgg > 1:2839136/1‑52 (MQ=255) accaaccaTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGcc < 1:1172004/55‑1 (MQ=255) accaaccaTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAAt > 1:1933163/1‑69 (MQ=255) caaccaTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGc < 1:859967/71‑1 (MQ=255) aaccaTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGc > 1:905440/1‑70 (MQ=255) caagagttgtgctttggcgtactgcgtacgctttcgcagttaGAc < 1:142646‑M1/3‑1 (MQ=255) caagagttgtgctttggcgtactgcgtacgctttcgcagttaGACGGGCCATTAACTTATTAATCAGcc > 1:44475‑M1/43‑69 (MQ=255) caTAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACggg < 1:5180260/47‑1 (MQ=255) gagttgtgctttggcgtactgcgtacgctttcgcagttaGa > 1:4425253‑M1/40‑41 (MQ=255) aTCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGa > 1:4043382/1‑39 (MQ=255) aTCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTaa > 1:2895357/1‑71 (MQ=255) tCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTa < 1:2764013/48‑1 (MQ=255) aGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTg > 1:3190931/1‑71 (MQ=255) aGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTg > 1:3310089/1‑71 (MQ=255) tAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCg > 1:3136785/1‑70 (MQ=255) tAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGa < 1:1752043/71‑1 (MQ=255) aTGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGa > 1:5144491/1‑69 (MQ=255) tggcgtactgcgtacgctttcgcagttaGACGGGCCATTAACTTATTAATCAGCCAg < 1:3178399‑M1/29‑1 (MQ=255) gCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTGACTGCGaa > 1:1153160/1‑68 (MQ=255) cACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATc > 1:2337438/1‑49 (MQ=255) cACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTa > 1:3828681/1‑59 (MQ=255) cACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCg > 1:28122/1‑71 (MQ=255) cACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCg > 1:2109203/1‑71 (MQ=255) cACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCg > 1:2331865/1‑71 (MQ=255) aCGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCg > 1:4889412/1‑70 (MQ=255) cGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTa < 1:719289/71‑1 (MQ=255) gTCCGCTGTTTGCCGGTCATCGGACGGGCCATTaa < 1:276353/35‑1 (MQ=255) ccGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTaa < 1:2066019/41‑1 (MQ=255) cGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAg > 1:4058846/1‑71 (MQ=255) gCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGt < 1:1920350/71‑1 (MQ=255) cTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTa > 1:3075954/1‑50 (MQ=255) cTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTa < 1:2511093/71‑1 (MQ=255) cTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTa > 1:3178878/1‑71 (MQ=255) tGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTaa > 1:708921/1‑50 (MQ=255) tGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTAc > 1:2938957/1‑71 (MQ=255) gTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGc < 1:4797623/65‑1 (MQ=255) ttGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAg > 1:1702635/1‑65 (MQ=255) tGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGt > 1:702977/1‑58 (MQ=255) gCCGGTCATCGGACGGTCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCa < 1:1933232/70‑1 (MQ=255) gCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCa < 1:4066401/70‑1 (MQ=255) gCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCa < 1:1622144/70‑1 (MQ=255) ccGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTAc < 1:4302733/65‑1 (MQ=255) ggTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCa < 1:4122998/67‑1 (MQ=255) gTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGca > 1:4695873/1‑71 (MQ=255) cATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGcact > 1:295543/1‑70 (MQ=255) cATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGca > 1:4369758/1‑69 (MQ=255) aTCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGCACaa > 1:4323568/1‑71 (MQ=255) ggACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGCACAActc < 1:4297548/71‑1 (MQ=255) ggACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGCACAAct < 1:4367282/70‑1 (MQ=255) GACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGaaa < 1:1512099‑M1/42‑1 (MQ=255) | TATAAAGCAGTTGATACAAACCAACCATAATCAGGTAATGCACGGTCCGCTGTTTGCCGGTCATCGGACGGGCCATTAACTTATTAATCAGCCAGTCTAACTGCGAAAGCGTACGCAGTACGCCAAAGCACAACTC > W3110S.gb/4204941‑4205076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |