| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1632687 | 20 (0.360) | 3 (0.060) | 3/90 | NT | 12.6% | intergenic (‑60/+29) | ydfI/ydfJ | predicted mannonate dehydrogenase/predicted transporter |
| ? | W3110S.gb | = 1632703 | 24 (0.480) | intergenic (‑76/+13) | ydfI/ydfJ | predicted mannonate dehydrogenase/predicted transporter | |||||
ATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTCCG > W3110S.gb/1632643‑1632768 | ataaatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAgg > 1:161071/1‑71 (MQ=255) aatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGtt < 1:3640486/71‑1 (MQ=255) tGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACa < 1:3506281/71‑1 (MQ=255) gCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTaa > 1:2485430/1‑60 (MQ=255) aGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACtt > 1:1651466/1‑71 (MQ=255) aGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACtt < 1:3804054/71‑1 (MQ=255) gCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTc < 1:2682817/71‑1 (MQ=255) atatGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTa > 1:4770478/1‑60 (MQ=255) atGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTgg > 1:1664559/1‑69 (MQ=255) ttttGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAgg < 1:4425717/70‑1 (MQ=255) tttGTTTTATGAATAAAAATCCCCTCTCCGGTAAGAGAAgg < 1:1297131‑M2/41‑3 (MQ=255) tttGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGttt < 1:2159511/53‑1 (MQ=255) tGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTg < 1:5061678/70‑1 (MQ=255) aaTAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGttt < 1:1701645/42‑1 (MQ=255) aTAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTa > 1:4745417/1‑71 (MQ=255) tAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAg > 1:3100408/1‑44 (MQ=255) aaaaTCCCCTCTCCGGTAAGAGAAgggatttttattcatataacaaaacatatagcttgccatatttatat < 1:3358839‑M2/71‑48 (MQ=255) tCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTgc < 1:4651637/54‑1 (MQ=255) cccTCTCCGGTAAGAGAAgggatttttattcatataa < 1:2419611‑M2/37‑20 (MQ=255) tctcCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCtt > 1:2041356/1‑58 (MQ=255) ctcCGGTAAGAGAAgggatttttattcatataacaaaacatatagcttgccat > 1:4142911‑M2/1‑14 (MQ=255) ctcCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGtt > 1:4361002/1‑70 (MQ=255) ccGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTgcgc > 1:2604172/1‑48 (MQ=255) gTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCtt < 1:3713319/71‑1 (MQ=255) tAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTc < 1:3815228/71‑1 (MQ=255) tAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTc > 1:2287635/1‑71 (MQ=255) aaGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCtt > 1:3556180/1‑69 (MQ=255) aaGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTcc > 1:3442674/1‑71 (MQ=255) aaGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTc < 1:3091429/70‑1 (MQ=255) agagAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTCCg > 1:2424894/1‑71 (MQ=255) gagaAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGctct < 1:4879193/47‑1 (MQ=255) agaAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTaca > 1:1890006/1‑50 (MQ=255) gaAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACAcg < 1:167627/54‑1 (MQ=255) aaGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTg < 1:4860698/59‑1 (MQ=255) | ATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAACACGCGGTTGATCTTCCG > W3110S.gb/1632643‑1632768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |