| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2044974 = | 48 (0.850) | 3 (0.060) | 3/90 | NT | 6.9% | coding (470/531 nt) | yodB | predicted cytochrome |
| ? | W3110S.gb | 2044999 = | 38 (0.770) | coding (495/531 nt) | yodB | predicted cytochrome | |||||
AATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCATGGA > W3110S.gb/2044931‑2045069 | aaTATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa < 1:925093/71‑1 (MQ=255) atatAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa > 1:3503516/1‑70 (MQ=255) tataGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata > 1:1882100/1‑71 (MQ=255) tACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGt > 1:4510638/1‑70 (MQ=255) tttAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata > 1:2863962/1‑59 (MQ=255) ttAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGaa < 1:4018735/70‑1 (MQ=255) tAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAat > 1:3983666/1‑70 (MQ=255) aaTCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTa > 1:4403254/1‑64 (MQ=255) aTCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGtt < 1:3088880/62‑1 (MQ=255) tCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg < 1:2515465/71‑1 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGcc < 1:2630969/71‑1 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGc > 1:3366363/1‑70 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGc > 1:2137181/1‑70 (MQ=255) gCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcg > 1:1309876/1‑71 (MQ=255) cTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgc > 1:3762158/1‑71 (MQ=255) tCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa > 1:4994884/1‑45 (MQ=255) tCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgc > 1:2214791/1‑70 (MQ=255) cACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgccg > 1:3452922/1‑71 (MQ=255) cACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgccg > 1:1502734/1‑71 (MQ=255) aCGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata < 1:3020511/45‑1 (MQ=255) aCGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata < 1:1055425/45‑1 (MQ=255) gCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTg < 1:3768990/48‑1 (MQ=255) gCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTg < 1:2926864/48‑1 (MQ=255) cTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGat > 1:1887305/1‑38 (MQ=255) tGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgat < 1:5125856/57‑1 (MQ=255) tGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgat < 1:1936044/57‑1 (MQ=255) gcgcAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAAt < 1:1379322/69‑1 (MQ=255) gcgcAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAAt < 1:2987974/69‑1 (MQ=255) cagcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGa < 1:236929/47‑1 (MQ=255) cagcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTc < 1:3877539/71‑1 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg > 1:5168522/1‑52 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg > 1:3653603/1‑52 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTc > 1:1723951/1‑70 (MQ=255) caCTCTTTCATCACTACATTCAGAAAGATAATAct < 1:3435088/35‑1 (MQ=255) caCTCTGTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGa > 1:665229/1‑70 (MQ=255) aCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATc < 1:895192/71‑1 (MQ=255) ctctTTCATCACTACATTCAGAAAGATAATACTCTGTTACGa > 1:3395278/1‑42 (MQ=255) ctctTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATc > 1:2521134/1‑70 (MQ=255) tctttctgaatgtagtgatgaaagaTAATACTCTGTTACGAATGATGcc < 1:3128555‑M2/24‑1 (MQ=255) TCTTTCATCACTACATTCAGAAAGATAATACTCTGt > 1:4791446‑M1/1‑36 (MQ=255) TCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCaaa > 1:2551580‑M1/1‑59 (MQ=255) CTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgcc < 1:4756367‑M1/53‑1 (MQ=255) tttctgaatgtagtgatgaaagaTAATACTCTGTTACGAATGATGCCTc > 1:3672999‑M2/24‑49 (MQ=255) TTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcg > 1:2576475‑M1/1‑50 (MQ=255) TCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGt < 1:4768037‑M1/60‑1 (MQ=255) TCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCt > 1:4640138‑M1/1‑69 (MQ=255) TCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTa < 1:690548‑M1/71‑1 (MQ=255) CATCACTACATTCAGAAAGATAATACTCTGTTACGaa < 1:4558322‑M1/37‑1 (MQ=255) CATCACTACATTCAGAAAGATAATACTCTGTTACGAatga < 1:1717133‑M1/40‑1 (MQ=255) CATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCaa < 1:5001089‑M1/53‑1 (MQ=255) tgaatgtagtgatgaaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATc > 1:1071637‑M2/20‑63 (MQ=255) atcaCTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCg < 1:860301/60‑1 (MQ=255) atcaCTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTAc < 1:4743420/70‑1 (MQ=255) aCTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCt < 1:389418/64‑1 (MQ=255) aCTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAg > 1:1277227/1‑70 (MQ=255) cTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCg < 1:916411/56‑1 (MQ=255) cATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCtt > 1:4995496/1‑61 (MQ=255) cATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGaa < 1:693172/69‑1 (MQ=255) cATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAAt > 1:262703/1‑71 (MQ=255) aTTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAAt < 1:373079/46‑1 (MQ=255) aTTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGAt > 1:704789/1‑54 (MQ=255) aTTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAAtg < 1:1858464/71‑1 (MQ=255) ttCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCg < 1:3678809/51‑1 (MQ=255) ttCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCg < 1:4538316/51‑1 (MQ=255) tCAGAAAGATAATACTCTGTTACGAATGATGCCTcg > 1:1015658/1‑36 (MQ=255) tCAGAAAGATAATACTCTGTTACGAATGATGCCTcg > 1:897055/1‑36 (MQ=255) cAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGAt > 1:359462/1‑51 (MQ=255) cAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAAtgt > 1:3699227/1‑69 (MQ=255) gaaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGAt > 1:187664‑M2/7‑49 (MQ=255) aaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTc > 1:629548‑M2/6‑45 (MQ=255) aaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAAc > 1:2569464‑M2/6‑70 (MQ=255) aagaTAATACTCTGTTACGAATGATGCCTCGCCGCaaa > 1:2410473‑M2/5‑38 (MQ=255) aagaTAATACTCTGTTACGAATGATGCCTCGCCGCaaa > 1:1557143‑M2/5‑38 (MQ=255) aagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCa > 1:599902‑M2/5‑71 (MQ=255) taataCTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCATGGa > 1:2787194/1‑71 (MQ=255) | AATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCATGGA > W3110S.gb/2044931‑2045069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |