| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2923137 | 89 (1.580) | 5 (0.100) | 4/90 | NT | 5.2% | intergenic (‑368/+254) | yqcC/syd | conserved hypothetical protein/hypothetical protein |
| ? | W3110S.gb | = 2923153 | 102 (2.050) | intergenic (‑384/+238) | yqcC/syd | conserved hypothetical protein/hypothetical protein | |||||
Only 100 of 130 total aligned reads displayed.
TTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTACAAGGCGCTTA > W3110S.gb/2923085‑2923223 | ttCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTca < 1:3510574‑M2/71‑3 (MQ=255)gtcATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTca < 1:55957‑M2/70‑3 (MQ=255) tCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTcac < 1:1201774‑M2/71‑4 (MQ=255) aTCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTcactt < 1:4917201‑M2/71‑6 (MQ=255) tCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTcacttc > 1:760021‑M2/1‑65 (MQ=255) cAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCg < 1:471533/70‑1 (MQ=255) cAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGt > 1:1386178/1‑71 (MQ=255) aGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt < 1:1932290/71‑1 (MQ=255) aGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt < 1:1715168/71‑1 (MQ=255) aGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt < 1:675343/71‑1 (MQ=255) gAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTg > 1:535972/1‑71 (MQ=255) aaGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGt < 1:4290503/71‑1 (MQ=255) aGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTc < 1:1470769/71‑1 (MQ=255) cTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGa > 1:6879/1‑71 (MQ=255) cTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGa > 1:4412774/1‑71 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCg > 1:82722/1‑62 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc > 1:2780795/1‑71 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc > 1:422926/1‑71 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc > 1:1823897/1‑71 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc > 1:428876/1‑71 (MQ=255) tttCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc > 1:739560/1‑71 (MQ=255) tCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTcacttc < 1:1068703‑M2/59‑7 (MQ=255) tCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGa > 1:2035626/1‑68 (MQ=255) tCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc < 1:4075733/69‑1 (MQ=255) tCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAc < 1:1848866/69‑1 (MQ=255) tCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTc > 1:3168374/1‑71 (MQ=255) cccTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc > 1:1875400/1‑71 (MQ=255) cccTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc > 1:1010717/1‑71 (MQ=255) cccTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc > 1:2984167/1‑71 (MQ=255) ccTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTccc > 1:5016827/1‑71 (MQ=255) cTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt < 1:1451176/59‑1 (MQ=255) cTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCt < 1:101595/71‑1 (MQ=255) tGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTcactt < 1:3853094‑M2/54‑6 (MQ=255) tGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc < 1:3275441/68‑1 (MQ=255) gAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGt > 1:2320751/1‑71 (MQ=255) aaaCACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTg < 1:4809578/69‑1 (MQ=255) aaaCACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTg < 1:3979328/69‑1 (MQ=255) aaaCACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTc > 1:3708401/1‑71 (MQ=255) aaaCACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTc > 1:1837182/1‑71 (MQ=255) acacCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTcga > 1:2923721/1‑71 (MQ=255) ccATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc > 1:3656742/1‑61 (MQ=255) ccATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTcc > 1:2752641/1‑61 (MQ=255) ccATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTcga > 1:1391328/1‑68 (MQ=255) cATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGaa < 1:4339021/71‑1 (MQ=255) tCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTcgacg > 1:3425488/1‑67 (MQ=255) tCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGa < 1:602145/71‑1 (MQ=255) ccTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTcg > 1:3682781/1‑63 (MQ=255) cTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGa > 1:1355772/1‑69 (MQ=255) gtgtgtCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGaa < 1:4041730/71‑1 (MQ=255) gtgtgtCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGaa < 1:3253202/71‑1 (MQ=255) gtgtgtCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGa < 1:1702781/70‑1 (MQ=255) tgtgtCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGaa < 1:2914635/70‑1 (MQ=255) tgtCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCg > 1:3782444/1‑71 (MQ=255) tCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTc < 1:4457310/71‑1 (MQ=255) tCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTc < 1:1757767/71‑1 (MQ=255) cTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCtt < 1:296659/71‑1 (MQ=255) cTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCt < 1:4113524/70‑1 (MQ=255) tGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACt < 1:2712412/43‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCttttt < 1:2145887/71‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCtttt < 1:2373526/70‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCtttt < 1:2451378/70‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCtttt < 1:1601205/70‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCttt < 1:3645459/69‑1 (MQ=255) cAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCttt < 1:5052561/69‑1 (MQ=255) aGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTc > 1:4413649/1‑71 (MQ=255) gAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTcg < 1:5040348/71‑1 (MQ=255) aaGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTcgc > 1:3155248/1‑71 (MQ=255) aaGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTcg > 1:3916590/1‑70 (MQ=255) aGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTcgcg < 1:4728007/71‑1 (MQ=255) gtgtCATCATCCTGATGTTcacttctgcaggacacaccaggatggtgtttcaggga > 1:4066128‑M2/1‑19 (MQ=255) tgtCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGaa < 1:4283797/71‑1 (MQ=255) gtCATCATCCTGATGTTcacttctgcaggacacaccaggatggtgtttcagggaaa < 1:4977615‑M2/56‑40 (MQ=255) tcatcaTCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGa < 1:2980223/48‑1 (MQ=255) atcatcCTGATGTTcacttctgcaggacacaccaggatggtgtttcagggaaaggcttctggat < 1:2240608‑M2/64‑51 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAg > 1:4052764/1‑45 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTcgcg < 1:834014/65‑1 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGaa < 1:2529343/67‑1 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:319882/1‑71 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:2339222/1‑71 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:1172012/1‑71 (MQ=255) atcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:3458606/1‑71 (MQ=255) tcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGAt < 1:4917118/46‑1 (MQ=255) tcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCtt < 1:4670802/71‑1 (MQ=255) tcatcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:4705180/1‑70 (MQ=255) catcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTa > 1:1045994/1‑71 (MQ=255) atcCTGATGTTCACTTCGTTGTCTGACTCCCTGTcga > 1:3310447/1‑37 (MQ=255) atcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGt > 1:4350663/1‑52 (MQ=255) atcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTa > 1:1226526/1‑70 (MQ=255) atcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTa < 1:3061187/70‑1 (MQ=255) atcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTa > 1:3018509/1‑70 (MQ=255) atcCTGATGTTCACTTCCTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTAc < 1:215537/71‑1 (MQ=255) tcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCtt < 1:434578/68‑1 (MQ=255) tcCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCt > 1:1953508/1‑67 (MQ=255) ccTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGaa < 1:3743749/39‑1 (MQ=255) ccTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCtt < 1:2551857/67‑1 (MQ=255) cTGATGATCACTTCGTTGGCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTa < 1:3444107/67‑1 (MQ=255) tGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTACAAg > 1:3729504/1‑70 (MQ=255) gATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTACAAg < 1:3607512/69‑1 (MQ=255) tCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTGGCGAAGTCt > 1:1900137/1‑58 (MQ=255) tCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTACAAGGCGCTTa > 1:1509805/1‑71 (MQ=255) | TTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGACTCCCTGTCGACGAAGATAGAATCGTCTTTTTCGCGAAGTCTTACAAGGCGCTTA > W3110S.gb/2923085‑2923223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |