| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3307000 = | 53 (0.940) | 4 (0.080) | 3/92 | NT | 8.1% | coding (716/1890 nt) | deaD | ATP‑dependent RNA helicase |
| ? | W3110S.gb | 3307021 = | 43 (0.850) | coding (695/1890 nt) | deaD | ATP‑dependent RNA helicase | |||||
TTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGC > W3110S.gb/3306951‑3307090 | tttGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtttt > 1:1418914/1‑71 (MQ=255) tGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGttttt < 1:3806981/70‑1 (MQ=255) cgaacgaaGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtttt > 1:901821/1‑64 (MQ=255) cgaacgaaGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCa > 1:4298358/1‑70 (MQ=255) acgaaGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATAcc < 1:831201/71‑1 (MQ=255) gaaGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCCGTGCTTCGTTTTTGCGCATAccc > 1:1274125/1‑70 (MQ=255) aaGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTgcg < 1:2190177/62‑1 (MQ=255) gATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGa > 1:3870401/1‑71 (MQ=255) aaTCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAg > 1:1279634/1‑71 (MQ=255) tCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCTCATACCCCAg < 1:1306213/65‑1 (MQ=255) tCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAg < 1:1566243/65‑1 (MQ=255) tCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAg < 1:4645392/65‑1 (MQ=255) tCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTc < 1:781595/71‑1 (MQ=255) ccgcATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAg < 1:4166956/71‑1 (MQ=255) ccgcATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAg > 1:4959066/1‑71 (MQ=255) cATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATa > 1:4236020/1‑53 (MQ=255) cATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAg > 1:3623936/1‑71 (MQ=255) aTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATAcc < 1:3027163/54‑1 (MQ=255) aTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCCCATACCCCAGACAGTCCAGTAGc < 1:3896037/71‑1 (MQ=255) tCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAg < 1:561573/61‑1 (MQ=255) tCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTc < 1:3650611/63‑1 (MQ=255) tCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGc > 1:61465/1‑70 (MQ=255) tCAAAATCTTCCGCCTCGAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCa < 1:1313850/65‑1 (MQ=255) aaaaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTg > 1:641827/1‑43 (MQ=255) aaaaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGAc > 1:1486857/1‑57 (MQ=255) aaaaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGctct > 1:1755473/1‑71 (MQ=255) aaaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCa > 1:3857336/1‑46 (MQ=255) aaaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATa > 1:3980668/1‑48 (MQ=255) aaaTCTTACGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTg > 1:1831150/1‑42 (MQ=255) aaTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTg > 1:3772573/1‑70 (MQ=255) aTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAg > 1:2532440/1‑61 (MQ=255) aTCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGc > 1:3531662/1‑71 (MQ=255) tCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCt > 1:2121110/1‑71 (MQ=255) tCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCt > 1:3699564/1‑71 (MQ=255) ttCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGa > 1:4350515/1‑71 (MQ=255) tCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGAt > 1:3046023/1‑71 (MQ=255) cTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGt > 1:4180359/1‑69 (MQ=255) cAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGAc < 1:1420577/71‑1 (MQ=255) ggAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGt > 1:704073/1‑63 (MQ=255) gAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACggg > 1:2095929/1‑71 (MQ=255) gAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACggg > 1:1569564/1‑71 (MQ=255) AACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTgg < 1:3133676‑M1/53‑1 (MQ=255) AACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTa > 1:4382541‑M1/1‑71 (MQ=255) acgaagcactggtacgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTgg > 1:3545174‑M2/20‑52 (MQ=255) acgaagcactggtacgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTgg > 1:3157558‑M2/20‑52 (MQ=255) ACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACggg > 1:1134792‑M1/1‑68 (MQ=255) GTACCAGTGCTTCGTTTTTGTGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACggg > 1:2970013‑M1/1‑66 (MQ=255) GTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTc > 1:998608‑M1/1‑71 (MQ=255) GTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTc > 1:2464917‑M1/1‑71 (MQ=255) tACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCa > 1:2278304/1‑71 (MQ=255) tACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCa > 1:4483424/1‑71 (MQ=255) agcactggtacgtttTTGCGCATACCCCAGACAGTCCa < 1:5084115‑M2/23‑1 (MQ=255) aCCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGctct > 1:4209593/1‑46 (MQ=255) ccAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGa > 1:3080970/1‑51 (MQ=255) cactggtacgtttTTGCGCATACCCCAGACAGTCCAGt > 1:4342927‑M2/14‑38 (MQ=255) cAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGc > 1:2141826/1‑71 (MQ=255) cAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGc > 1:3240218/1‑71 (MQ=255) cAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGc > 1:3190876/1‑71 (MQ=255) gTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTg < 1:3511898/71‑1 (MQ=255) tGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGc < 1:269875/38‑1 (MQ=255) gCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGa > 1:4846192/1‑71 (MQ=255) tCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCt > 1:1555042/1‑65 (MQ=255) cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTg < 1:4702830‑M2/65‑1 (MQ=255) cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTg > 1:4880063‑M2/6‑70 (MQ=255) cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTg < 1:4037486‑M2/65‑1 (MQ=255) cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTg > 1:3869927‑M2/6‑70 (MQ=255) tttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGt < 1:772715‑M2/40‑1 (MQ=255) tttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAAt < 1:3160370‑M2/68‑1 (MQ=255) tTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACggg < 1:1045127‑M2/49‑1 (MQ=255) tTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg > 1:2062910‑M2/2‑53 (MQ=255) tTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAAt > 1:2942232‑M2/2‑69 (MQ=255) tTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGc > 1:3351333‑M2/2‑71 (MQ=255) tTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGc > 1:1717550‑M2/2‑71 (MQ=255) | TTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGC > W3110S.gb/3306951‑3307090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |