| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3354886 | 47 (0.840) | 3 (0.060) | 3/92 | NT | 6.0% | coding (400/4554 nt) | gltB | glutamate synthase, large subunit |
| ? | W3110S.gb | = 3354897 | 51 (1.000) | coding (411/4554 nt) | gltB | glutamate synthase, large subunit | |||||
TCGGGATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAATCG > W3110S.gb/3354827‑3354967 | tCGGGATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTg > 1:4182930/1‑71 (MQ=255) gggATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTg > 1:3160991/1‑69 (MQ=255) gggATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGc > 1:4667011‑M2/1‑69 (MQ=255) gggATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGc > 1:1683642‑M2/1‑69 (MQ=255) ggATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGcaa > 1:5087710‑M2/1‑68 (MQ=255) tGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAAcgc < 1:4337912/71‑1 (MQ=255) tGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAAcgc > 1:1421548/1‑71 (MQ=255) ctctTCCTGAATAAAGATCCTGAACTCGCCGCTGCCTCACGCCGCATCGTTGAAGAAGAACTGCAAcgcg < 1:1572724/70‑1 (MQ=255) ctctTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAAcgcg < 1:4391355/70‑1 (MQ=255) tctTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGa > 1:1399113/1‑70 (MQ=255) ctTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGaaa > 1:4850252/1‑71 (MQ=255) ccTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAAcc < 1:3045327/70‑1 (MQ=255) cTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCt < 1:2895890/70‑1 (MQ=255) aaGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGcaac < 1:2422975‑M2/54‑5 (MQ=255) aaGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGAt < 1:4140627/70‑1 (MQ=255) aGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtg > 1:3425025/1‑71 (MQ=255) aTCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGcaacg < 1:1998113‑M2/52‑6 (MQ=255) aTCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgtg < 1:3767270/71‑1 (MQ=255) aTCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgt < 1:1660831/70‑1 (MQ=255) tCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACAGCAACGCGAAACCTTGTCGATTGTgg > 1:2940746/1‑71 (MQ=255) cTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGa < 1:4796198/52‑1 (MQ=255) cTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCtt > 1:747147/1‑58 (MQ=255) cTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTggg < 1:4742735/70‑1 (MQ=255) cTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGc > 1:939207/1‑71 (MQ=255) aCTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTgg < 1:222556/70‑1 (MQ=255) cTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGc > 1:4532871/1‑70 (MQ=255) cTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCg > 1:1637247/1‑71 (MQ=255) cTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCg > 1:3249648/1‑71 (MQ=255) tCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgtg > 1:4717715/1‑62 (MQ=255) cgccgcTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGaa < 1:144172/46‑1 (MQ=255) cgccgcTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGt > 1:2207879/1‑70 (MQ=255) gccgcTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGa > 1:4781619/1‑71 (MQ=255) gccgcTGCCGCACGCCGCATCGTTGAAGAAGAAATGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGt < 1:807899/69‑1 (MQ=255) gcTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATg < 1:285446/70‑1 (MQ=255) gcTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGATGGCGTg < 1:3452871/67‑1 (MQ=255) gCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGt > 1:2817142/1‑60 (MQ=255) cACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCa > 1:1247498/1‑69 (MQ=255) aCGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGACGa > 1:229168/1‑44 (MQ=255) cgccgcATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCa > 1:4626121/1‑67 (MQ=255) cgccgcATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTaa < 1:3468710/71‑1 (MQ=255) ccgcATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACg < 1:810542/71‑1 (MQ=255) cgcATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACg > 1:3979868/1‑70 (MQ=255) cgcATCGTTGAAGAAGAACTGCAACGCAAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACg > 1:3131993/1‑70 (MQ=255) cATCGTTGAAGAAGGACTGCAACGCGAAACCTTGTCGa > 1:3596686/1‑38 (MQ=255) cATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGa > 1:1085289/1‑38 (MQ=255) aTCGTTGAAGAAGAACTGcaacgatgcggcgtgcggcagcggcgagttcaggatcttt > 1:4068301‑M2/1‑18 (MQ=255) tCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgtg < 1:1136501/41‑1 (MQ=255) tCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgtg < 1:1719854/41‑1 (MQ=255) tCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGc > 1:3913837/1‑71 (MQ=255) cGTTGAAGAAGAACTGcaacgatgcggcgtgcggcagcggcgagttcaggatctttatt < 1:1475798‑M2/59‑44 (MQ=255) gTTGAAGAAGAACTGcaacgatgcggcgtgcggcagcggcgagttcaggatctttattcaggaagagcatc < 1:2348516‑M2/71‑57 (MQ=255) gTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATtgtg > 1:3107700/1‑39 (MQ=255) gTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCg < 1:2095561/70‑1 (MQ=255) ttGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGt < 1:3334327/47‑1 (MQ=255) gaagaagaaCTGCAACGCGAAACCTAGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGc < 1:4371268/70‑1 (MQ=255) aagaagaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCt < 1:359406/70‑1 (MQ=255) aagaagaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCt < 1:4474562/70‑1 (MQ=255) agaagaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCt < 1:211736/69‑1 (MQ=255) agaagaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTgg < 1:1013443/71‑1 (MQ=255) aagaaCTGCCACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTggg > 1:1956909/1‑70 (MQ=255) agaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGt > 1:4504081/1‑70 (MQ=255) agaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTg < 1:3805864/71‑1 (MQ=255) agaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTg < 1:1912170/71‑1 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGc < 1:5052506/37‑1 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGc < 1:1220621/37‑1 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACt < 1:4827857/51‑1 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTg > 1:71085/1‑70 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGa < 1:1289233/71‑1 (MQ=255) gaaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGa < 1:3818518/71‑1 (MQ=255) aaCTGCAACGCGAAACCTTTTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGa > 1:4339631/1‑70 (MQ=255) aaCTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGaa < 1:867913/71‑1 (MQ=255) cTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTaa > 1:4968293/1‑50 (MQ=255) cTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAAt < 1:4242840/71‑1 (MQ=255) tGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGa < 1:4227979/67‑1 (MQ=255) tGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGa < 1:4683807/67‑1 (MQ=255) gCAACGAGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAATCg > 1:6558/1‑71 (MQ=255) | TCGGGATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAATCG > W3110S.gb/3354827‑3354967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |