| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3568734 | 29 (0.520) | 3 (0.060) | 3/90 | NT | 10.4% | coding (1330/2037 nt) | yihQ | alpha‑glucosidase |
| ? | W3110S.gb | = 3568756 | 26 (0.520) | coding (1352/2037 nt) | yihQ | alpha‑glucosidase | |||||
CCTGCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAG > W3110S.gb/3568692‑3568823 | cctgCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttctt > 1:3828661‑M2/1‑65 (MQ=255)cctgCGCTGTGGGCGAAGTGTAACTACGAAGCCCGTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttct > 1:2024156‑M2/1‑65 (MQ=255)cctgCGCTGCGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttct > 1:21387‑M2/1‑65 (MQ=255) ctgCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCttt < 1:603892/71‑1 (MQ=255) tgCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTa > 1:3487852/1‑71 (MQ=255) cgcTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATg > 1:2399178/1‑71 (MQ=255) cTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATgcg > 1:4315654/1‑71 (MQ=255) tgtgGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttct > 1:1041368‑M2/1‑58 (MQ=255) tgtgGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttct > 1:396153‑M2/1‑58 (MQ=255) tgGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATgc > 1:2803932/1‑67 (MQ=255) ggCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTa > 1:4381373/1‑62 (MQ=255) aGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGGGAGATCCTttt > 1:4994758‑M2/1‑49 (MQ=255) aGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCt < 1:3836561/71‑1 (MQ=255) gtgtAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCt < 1:5186667/70‑1 (MQ=255) gtgtAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTa < 1:3453730/71‑1 (MQ=255) tgtAACTACGAAGCCCTTGAAGAAACGGGTAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTAc < 1:3904682/71‑1 (MQ=255) tAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTAcc < 1:2232054/70‑1 (MQ=255) aCTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCgg < 1:4752827/70‑1 (MQ=255) aCTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCgg > 1:1290819/1‑70 (MQ=255) aaGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTtttctt < 1:3119054‑M2/43‑7 (MQ=255) aaGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAg < 1:96872/71‑1 (MQ=255) cccTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAg > 1:1778699/1‑68 (MQ=255) tGAAGAAACGGGCAAGCTCGGCGAGATCCTtttcttcaagggcttcgtagttacacttcgcccacagc > 1:4964538‑M2/1‑30 (MQ=255) gaagaaACGGGCAAGCTCGGCGAGATCCTtttcttcaagggcttcgtagttacacttcgcccacagcgca < 1:3416444‑M2/70‑42 (MQ=255) gaagaaACGGGCAAGCTCGGCGAGATCCTTTTCTTTa > 1:3270128/1‑37 (MQ=255) gaagaaACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTc > 1:3444576/1‑71 (MQ=255) gaagaaACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTc > 1:3821493/1‑71 (MQ=255) gaaACGGGCAAGCTCGGCGAGATCCTtttcttcaagggcttcgtagttacacttcgcccacagcgcagg < 1:3156478‑M2/69‑44 (MQ=255) gaaACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGt > 1:1726830/1‑45 (MQ=255) gCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGaa > 1:5035413/1‑55 (MQ=255) cAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGAtgt < 1:3204036/71‑1 (MQ=255) aaGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGAtgtg < 1:2314456/71‑1 (MQ=255) aGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgg < 1:3123827/71‑1 (MQ=255) gCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAg < 1:2308599/45‑1 (MQ=255) gCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTggg < 1:226604/71‑1 (MQ=255) cTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggc < 1:4792362/71‑1 (MQ=255) tCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggcg > 1:679873/1‑71 (MQ=255) ggCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggcggt < 1:3633525/71‑2 (MQ=255) ggCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggcg < 1:3903413/69‑1 (MQ=255) gCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggcgggc < 1:3689836/71‑1 (MQ=255) gCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTgggcgggc < 1:210436/71‑1 (MQ=255) agaTCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGAc > 1:4795200/1‑71 (MQ=255) tCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg < 1:738252/71‑1 (MQ=255) tCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg < 1:118489/71‑1 (MQ=255) tCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg < 1:3068408/71‑1 (MQ=255) ccTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGaaa > 1:1603063/1‑40 (MQ=255) ccTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg > 1:1994479/1‑70 (MQ=255) ccTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg > 1:1407191/1‑70 (MQ=255) ccTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAg > 1:2417369/1‑70 (MQ=255) cTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGa < 1:4277503/37‑1 (MQ=255) ttttCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCatga < 1:3158122/51‑1 (MQ=255) | CCTGCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAG > W3110S.gb/3568692‑3568823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |