| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3740269 = | 45 (0.800) | 3 (0.060) | 3/96 | NT | 5.6% | coding (196/1338 nt) | yieG | predicted inner membrane protein |
| ? | W3110S.gb | 3740299 = | 58 (1.100) | coding (226/1338 nt) | yieG | predicted inner membrane protein | |||||
CTTGGCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCGC > W3110S.gb/3740230‑3740369 | cTTGGCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtat > 1:3681458/1‑71 (MQ=255) gCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTatg < 1:468998/71‑1 (MQ=255) cGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTatga < 1:88684/71‑1 (MQ=255) gTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtattat < 1:247650/68‑1 (MQ=255) cTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGta < 1:4636019/60‑1 (MQ=255) cTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGa < 1:3699766/71‑1 (MQ=255) gCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGAc > 1:3117094/1‑69 (MQ=255) gCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACt < 1:2683451/70‑1 (MQ=255) aTGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtatta < 1:968174/58‑1 (MQ=255) ggATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTg > 1:2678669/1‑71 (MQ=255) gATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTg < 1:4656402/70‑1 (MQ=255) gATACCAGCGCCGTCTTCGTCACTACCTGTCCGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGc < 1:4380553/71‑1 (MQ=255) tACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTa < 1:4797217/71‑1 (MQ=255) tACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTa < 1:2925552/71‑1 (MQ=255) aCCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGa > 1:3129368/1‑60 (MQ=255) ccAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAAc < 1:3337942/71‑1 (MQ=255) gTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGt < 1:4751985/71‑1 (MQ=255) gTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGt < 1:1109568/71‑1 (MQ=255) gTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGt < 1:2093528/71‑1 (MQ=255) tCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtatta < 1:1302045/42‑1 (MQ=255) tCTTCGTCACTACCTGTCTGATCCCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAg < 1:1162308/69‑1 (MQ=255) cTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTg > 1:1748448/1‑71 (MQ=255) ttCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTatg > 1:2038301/1‑42 (MQ=255) ttCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTatg > 1:3047792/1‑42 (MQ=255) ttCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGAGACTGTTTGCTAACCTGCCAGTTg > 1:1821169/1‑70 (MQ=255) tCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtattat < 1:1632624/40‑1 (MQ=255) tCGTCACTACCTGTCTGATCGCTGCATTCGGCAGtattat < 1:3514969/40‑1 (MQ=255) cGTCACTACCTGTCTGATCGCTGCATTGGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCa < 1:4054913/70‑1 (MQ=255) cGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGc < 1:3112223/62‑1 (MQ=255) cGTCACTACCTGTCTGATAGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAAc > 1:2759274/1‑58 (MQ=255) gTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAAc > 1:3432423/1‑57 (MQ=255) gTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCAc < 1:1457467/70‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTCGGCAGTATTatga < 1:1033827/39‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGc < 1:700306/60‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGc < 1:870349/60‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCa < 1:3765356/68‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCAc < 1:4488545/69‑1 (MQ=255) tCACTACCTGTCTGATCGCTGCATTAGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCAc < 1:1129764/69‑1 (MQ=255) ACTACCTGTCTGATCGCTGCATTCGGCAGTATTatgat < 1:4300958‑M1/38‑1 (MQ=255) ACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTgg > 1:4615754‑M1/1‑70 (MQ=255) ctgccgaatgcagcgatcagacaggtagtATTATGATGGGACTGTTTGCTAACCTGCCAGTGCAACTGGCa < 1:3197515‑M2/42‑1 (MQ=255) tgccgaatgcagcgatcagacaggtagtATTATGATGGGACTGTTTGCTAAc > 1:505604‑M2/29‑52 (MQ=255) TACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACt > 1:3673079‑M1/1‑42 (MQ=255) TACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGtt > 1:4080771‑M1/1‑45 (MQ=255) ccTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCAccc > 1:2955255/1‑71 (MQ=255) cTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTg < 1:5085004/40‑1 (MQ=255) cTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCg > 1:2843403/1‑71 (MQ=255) tGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTa < 1:2341759/46‑1 (MQ=255) tGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGc > 1:1252959/1‑71 (MQ=255) gTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGc > 1:2241694/1‑43 (MQ=255) gTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTg < 1:3102893/57‑1 (MQ=255) gTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGc > 1:3341641/1‑70 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGc < 1:1184856/63‑1 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGc < 1:3129413/63‑1 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCAccctc < 1:4139485/69‑3 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGc < 1:1567214/69‑1 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGc < 1:1825557/69‑1 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTa > 1:3448733/1‑71 (MQ=255) tCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTa > 1:1732986/1‑71 (MQ=255) cTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTAt > 1:3946153/1‑71 (MQ=255) tGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCAc > 1:2649222/1‑63 (MQ=255) cagcgatcagacaggcagtATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATg < 1:783931‑M2/51‑1 (MQ=255) aTCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTAt < 1:495427/68‑1 (MQ=255) tCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGc < 1:2012898/71‑1 (MQ=255) tCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGc < 1:4772917/71‑1 (MQ=255) cGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTa > 1:4391952/1‑65 (MQ=255) cGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGcc > 1:1847701/1‑71 (MQ=255) cATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTg > 1:4728074/1‑50 (MQ=255) cATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTg > 1:901994/1‑50 (MQ=255) cATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAAt > 1:2731701/1‑71 (MQ=255) aTTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATg < 1:4432361/71‑1 (MQ=255) ttCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGc > 1:4015746/1‑71 (MQ=255) ggCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGc < 1:2838728/53‑1 (MQ=255) cAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGttct > 1:2759054/1‑71 (MQ=255) cAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGttct < 1:4404600/71‑1 (MQ=255) agtATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGttctt > 1:5098965‑M2/4‑71 (MQ=255) tATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCg < 1:763322‑M2/70‑1 (MQ=255) attatGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCGc > 1:4022679/1‑71 (MQ=255) | CTTGGCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCGC > W3110S.gb/3740230‑3740369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |