| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 16579 = | NA (NA) | 6 (0.130) | 3/92 | NT | NA | intergenic (+22/+172) | insL/hokC | IS186/IS421 transposase/toxic membrane protein, small |
| ? | W3110S.gb | 16610 = | NA (NA) | intergenic (+53/+141) | insL/hokC | IS186/IS421 transposase/toxic membrane protein, small | |||||
CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/16651‑16579‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCAC > W3110S.gb/16610‑16679 CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCA > 1:4092697/1‑71CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCA > 1:20744/1‑71CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCA > 1:680639/1‑71CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACC > 1:723321/1‑70 TTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACC > 1:4422257/1‑69 TCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT > 1:824717/1‑71 CAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT > 1:735258/1‑70 CAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT > 1:2238321/1‑70 CAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCAT < 1:2829099/69‑1 TTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT > 1:4372036/1‑67 TTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACC < 1:753118/59‑1 GGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGAC > 1:2307009/1‑51 TCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT < 1:3885297/38‑1 TCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT < 1:1923489/38‑1 ATGGCCACCTGTAAGCTCCAGATGACCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAA < 1:4223613/71‑1 ATGGCCACCTGTAAGCTCCAGATGACCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAA < 1:934187/71‑1 GCCACCTGTAAGCTCCAGATGACCATTCGTGGGACAGTATCCCTGA > 1:1830053/1‑46 GCCACCTGTAAGCTCCAGATGACCATTCGTGGGACAGTATCCCTGA > 1:1320075/1‑46 GCCACCTGTAAGCTCCAGATGACCATTCGTGGGACAGTATCCCTGA > 1:4023377/1‑46 GCTCCAGATGACCATTCGTGGGACAGTATCCCTGACAGC < 1:3774861/39‑1 CCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA > 1:3157943/1‑54 CCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTAAAGAACGCGAGGCATCGTCTTAAC < 1:1668893/68‑1 CATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAA > 1:2564039/1‑45 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGC < 1:917124/71‑1 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGC < 1:2424923/71‑1 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGG > 1:849888/1‑70 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGA > 1:205962/1‑52 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAG > 1:2447825/1‑45 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:1590776/1‑71 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:4663611/1‑71 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:4303770/1‑71 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:3274327/1‑71 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:113245/1‑71 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGA > 1:3837705/1‑67 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCG < 1:3440250/58‑1 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCG < 1:2187800/50‑1 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAA > 1:4589590/1‑46 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAG < 1:2239713/44‑1 TTCGTGGGACAGTATCCCTGACAGCCTACAAAACGC < 1:434773/36‑1 TCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCAC > 1:1311817/1‑71 TCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCAC > 1:164446/1‑71 TCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCA > 1:2854616/1‑70 TCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTT < 1:735509/61‑1 TCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGC < 1:4572132/48‑1 CTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/16651‑16579‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCAC > W3110S.gb/16610‑16679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |