| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 227317 = | NA (NA) | 3 (0.070) | 3/92 | NT | NA | noncoding (1559/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | W3110S.gb | 227342 = | NA (NA) | noncoding (1584/2904 nt) | rrlH | 23S ribosomal RNA | |||||
Only 100 of 107 total aligned reads displayed.
CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/227389‑227317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcaTCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAG > W3110S.gb/227342‑227411 CTACCTGACCACCTGTGTCTGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:2506196/1‑71CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:4057421/1‑71CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:1883015/1‑71CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:1408589/1‑71CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:3775303/1‑71CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAA > 1:638602/1‑70 cACCTGACCACCTGTGTCGGGTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:2970655/69‑1 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:326817/1‑70 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:3159242/1‑70 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:666760/1‑70 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:4074618/1‑70 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:1163908/1‑70 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAA < 1:4448507/69‑1 TACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA < 1:122914/68‑1 ACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:2928822/1‑69 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:4047594/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:1066399/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:2930481/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:2803201/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:3513424/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:1283472/70‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:612170/69‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:3849873/69‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:4006398/69‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:4034111/69‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:4614923/68‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:2575249/68‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:577786/68‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:1323289/68‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:2659571/68‑1 CCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCATGGAAGCA > 1:1503854/1‑70 CTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:4148136/67‑1 TGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:2584599/1‑68 TGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:846657/68‑1 GACCACCTGTGTCGGTTTGGGGTACGAATTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:4300540/1‑67 CTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG > 1:1372907/1‑59 TGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTTGAAGCA < 1:4297260/58‑1 TGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:3382067/57‑1 TGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:3389212/57‑1 TCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:2944562/55‑1 TCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC > 1:3335141/1‑55 TTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:4706838/50‑1 TTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:2668262/50‑1 TTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:3349505/50‑1 TTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA < 1:2862209/48‑1 TGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:3186930/1‑50 TGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA < 1:260475/46‑1 GGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:3549595/49‑1 TACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:41654/45‑1 TACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:3837806/44‑1 TACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA < 1:975816/41‑1 ACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAG < 1:944525/42‑1 GATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:3894559/41‑1 GATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGC < 1:2707636/41‑1 ATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA < 1:2609207/41‑1 TTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:981263/1‑40 TTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:3343565/1‑40 TTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:1591215/1‑40 TTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA > 1:2969779/1‑39 TGCTTAGAGGCTTTTCCTGGAAGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTG > 1:484945/1‑64 TTAGAGGCTTTTCCTGGAAGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTA > 1:2864962/1‑69 GAGGCTTTTCCTGGAAGCATCAGGTAACATCAAATCGTA > 1:2577247/1‑39 AAGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACaa > 1:1434067/1‑60 AAGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:3299591/1‑70 AAGCATAAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:1757955/1‑70 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCATGTAGAGAATACCAAGGCGCTTGA < 1:1475676/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:167656/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:4421628/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:4672760/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:4130149/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:519653/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:697348/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:88814/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA < 1:1371187/71‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTG < 1:3448127/70‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTG < 1:4663109/70‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:4426152/1‑69 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:938317/1‑69 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:927319/1‑69 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:3756445/1‑69 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT < 1:1458635/69‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT < 1:2944914/69‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:1723256/1‑69 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT < 1:1773111/69‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAA > 1:3502252/1‑56 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAA > 1:904359/1‑56 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAG < 1:1117377/54‑1 AGCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAG < 1:3268624/54‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:774496/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:1240647/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:1775072/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:3410056/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:760227/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:3401506/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAG < 1:412122/71‑1 GCATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTT > 1:2185576/1‑68 CATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGA < 1:472767/71‑1 CATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGA > 1:4692663/1‑69 ATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAG < 1:1993092/71‑1 ATCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAG < 1:3301298/71‑1 CTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/227389‑227317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcaTCAGGTAACATCAAATCGTACCCCAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAG > W3110S.gb/227342‑227411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |