| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1099139 = | 62 (1.220) | 3 (0.070) | 3/86 | NT | 6.2% | coding (20/738 nt) | ycdX | predicted zinc‑binding hydrolase |
| ? | W3110S.gb | 1099171 = | 38 (0.890) | coding (52/738 nt) | ycdX | predicted zinc‑binding hydrolase | |||||
TAATGCCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1099216‑1099139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcatatAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCAT > W3110S.gb/1099171‑1099239 TAATGCCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTA > 1:1379847/1‑71TAATGCCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTA > 1:3204460/1‑71 AATGCCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTAT > 1:2634267/1‑71 CCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCA < 1:4669371/70‑1 CCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCA > 1:3174925/1‑70 CTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCATA > 1:2669050/1‑70 TTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCATAT > 1:3456514/1‑70 TTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCATAT > 1:2587266/1‑70 TTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATG < 1:3773355/60‑1 TTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTA < 1:4363863/58‑1 TGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCAT < 1:3066050/49‑1 ATATGCATGTGTGCTGGCAACGGTATGCATATGGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAG > 1:965952/1‑71 ATGTGTGCTGGCAACGGTATGCATATAGCACATTAAGTGATTACATTGCCCA > 1:1704960/1‑52 GTGTGCTGGCAACGGTATGCATATAGCACATTAAGT < 1:4185493/36‑1 ATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGAT > 1:2737695/1‑67 GCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGA > 1:287914/1‑71 GCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGA > 1:508776/1‑71 CATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGAT < 1:3812937/71‑1 CATATAGCACATTAAGTGATTACATTGCCCAGGCCAA > 1:3403907/1‑37 ATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGA < 1:1723563/69‑1 TATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTA < 1:3258561/49‑1 ATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCAT > 1:1513230/1‑71 ATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCA > 1:1302485/1‑70 ATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTT > 1:2060019/1‑54 ATAGAACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCA > 1:40127/1‑70 TAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCAC < 1:2827662/63‑1 TAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGAT > 1:572203/1‑60 TAGCACATTAAGTGATTACATTGCCCAGGCCAAAC > 1:137250/1‑35 TAATGCCCTTTTGTTTGGCCTGGGCAATGTAATCACTTAATGTGCTATATGCATGTGTGCTGGCAACGGTATGCATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1099216‑1099139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcatatAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCAT > W3110S.gb/1099171‑1099239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |