New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1044511	44 (0.750)	3 (0.060)	3/82	NT	6.9%	coding (122/2181 nt)	yccC	cryptic autophosphorylating protein tyrosine kinase Etk
	?	W3110S.gb	= 1044520	46 (0.980)					coding (113/2181 nt)	yccC	cryptic autophosphorylating protein tyrosine kinase Etk

TTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1044432‑1044511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagcgtgaCCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTC  <  W3110S.gb/1044520‑1044452                                                                                                                                                       TTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGA                                                                                >  1:1770665/1‑71   TTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGAT                                                                               <  1:3942763/70‑1   TTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGAT                                                                               >  1:3138289/1‑70      GCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAG                                                                            <  1:1364191/70‑1      GCTCAACCTGGACCAGAGTATCTGCCTCATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAG                                                                            <  1:2971940/70‑1         CAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGT                                                                         >  1:4110635/1‑70         CAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGT                                                                         >  1:319148/1‑70          AACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA                                                                       <  1:2128284/71‑1          AACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGT                                                                         <  1:1959842/69‑1          AACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAG                                                                            >  1:2703463/1‑66          AACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGAT                                                                               >  1:2628722/1‑63             CTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTG                                                                        >  1:4560055/1‑67                              CCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGACCGCGTTATTCACGCTG                                                      <  1:433912/68‑1                                TGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGACCGCGTTATTCACGC                                                        <  1:2511208/64‑1                                  ATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGACCGCGTTATTCACGCTG                                                      >  1:4310472/1‑64                                       TTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGC                                                                           <  1:2256028/38‑1                                           TGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGT                                                                         <  1:905248/36‑1                                                                       ATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGG           <  1:2483386/70‑1                                                                       ATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGG           <  1:5129842/70‑1                                                                       ATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTAT               <  1:1634712/66‑1                                                                       ATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTAT               <  1:74846/66‑1                                                                          AGCGTGACCGCGTTATTCACGCTGATCGCTGTCTCTTACTCGCTGTT                               >  1:2364494/1‑47                                                                              TGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAG        >  1:1178141/1‑66                                                                                ACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTC  <  1:2634284/70‑1                                                                                ACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTC  <  1:4815665/70‑1                                                                                                                                                       TTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1044432‑1044511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagcgtgaCCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTC  <  W3110S.gb/1044520‑1044452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.