New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	1736969 =	61 (1.040)	3 (0.070)	3/80	NT	6.5%	intergenic (+5/‑123)	ydhO/sodB	predicted lipoprotein/superoxide dismutase, Fe
	?	W3110S.gb	1736997 =	38 (0.830)					intergenic (+33/‑95)	ydhO/sodB	predicted lipoprotein/superoxide dismutase, Fe

ATTGTGCGTATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACAGGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/1737047‑1736969 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGT  >  W3110S.gb/1736997‑1737062                                                                                                                                                   ATTGTGCGTATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAA                                                                            >  1:3698007/1‑71   TGTGCGTATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAA                                                                            >  1:2404878/1‑69    GTGCGTATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACA                                                                          <  1:2289403/70‑1          ATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACAGGGTA                                                                     >  1:1944048/1‑69                   GTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAAC                                                                           >  1:3800192/1‑54                          ATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACAGGGTAA                                                                    >  1:3515634/1‑54                              AAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACA                                                                          <  1:1919064/44‑1                                   TGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACAGGGTA                                                                     <  1:101878/44‑1                                                          TGTTGCCGTAACAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCAC                    >  1:3659016/1‑70                                                          TGTTGCCGTAACAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATT                                         <  1:5228616/49‑1                                                             TGCCGTAACAACAGGGTAAGTTCATCTTTTGTCTCA                                                   >  1:2162059/1‑36                                                                     CAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGC            <  1:1497085/67‑1                                                                     CAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCC                                 <  1:3145022/46‑1                                                                       ACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGT      <  1:1401689/71‑1                                                                        CAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTA     <  1:4955592/71‑1                                                                        CAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGC            <  1:471576/64‑1                                                                          GGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACG   <  1:5161005/71‑1                                                                          GGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACG   <  1:537272/71‑1                                                                           GGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGT  <  1:1697289/71‑1                                                                           GGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATA                <  1:3690613/57‑1                                                                            GTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACG                       <  1:1013278/49‑1                                                                             TAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAA                  <  1:3113855/53‑1                                                                             TAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAA                  <  1:2317448/53‑1                                                                               AGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAA                  >  1:3751062/1‑51                                                                                                                                                   ATTGTGCGTATGGATAGGGTAGCAAATTAAAAGGTGAGACAAAAGATGAACTTACCCTGTTGCCGTAACAACAGGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/1737047‑1736969 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGT  >  W3110S.gb/1736997‑1737062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.