New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb = 256069146 (0.790)4 (0.070) 3/96 NT 7.8% coding (484/501 nt) yffI predicted carboxysome structural protein with predicted role in ethanolamine utilization
?W3110S.gb = 2560710 51 (0.930)coding (465/501 nt) yffI predicted carboxysome structural protein with predicted role in ethanolamine utilization

TCTTTTTCATGATGTTAATGCCGGGTGTTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2560619‑2560691
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACACCC  <  W3110S.gb/2560710‑2560641
                                                                                                                                               
TCTTTTTCATGATGTTAATGCCGGGTGTTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGA                                                                          >  1:4173842/1‑71
TCTTTTTCATGATGTTAATGCCGGGTGTTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGA                                                                          >  1:688839/1‑71
                  TGCCGGGTGTTGTAGGACACCCGGCACCTCCGCCAGGTTAATGGGGCTTGAGAC                                                                         >  1:3812060/1‑54
                     CGGGTGTTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGACGTAAACGCAGT                                                              <  1:4449974/62‑1
                           TTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGACG                                                                        <  1:4722251/46‑1
                                        GGCACCTCCGACAGGTTAATGGGGCTTGAGACGTAAACGCAGTAGTCGTTATCGT                                                  >  1:2026886/1‑55
                                        GGCACCTCCGACAGGTTAATGGGGCTTGAGACGTAAACGCAGTAGTCGTTATCGT                                                  >  1:4486604/1‑55
                                               CCGACAGGTTAATGGGGCTTGAGACGTAAACGCAGTAGTCGTTATCGTC                                                 >  1:1319357/1‑49
                                                                      ACGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACAC    >  1:4798835/1‑71
                                                                      ACGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACAC    >  1:874159/1‑71
                                                                      ACGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCG                            >  1:1209023/1‑47
                                                                       CGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACACC   <  1:2886588/71‑1
                                                                        GTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACACCC  <  1:4849006/71‑1
                                                                        GTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGG                           <  1:4207184/46‑1
                                                                                                                                               
TCTTTTTCATGATGTTAATGCCGGGTGTTGTAGGACACCCGGCACCTCCGACAGGTTAATGGGGCTTGAGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2560619‑2560691
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAACCTGTCGGAGGTGCCGGGTGTCCTACAACACCC  <  W3110S.gb/2560710‑2560641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.